Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 97.56 | 97.56 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 96.75 | 96.75 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 95.12 | 95.12 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 77.24 | 73.64 |
| Os04t0586000-00 | Rice | nucleus | 75.61 | 73.23 |
| Zm00001d002523_P001 | Maize | nucleus | 75.61 | 72.66 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 38.21 | 50.54 |
| TraesCS6D01G242700.1 | Wheat | nucleus | 44.72 | 43.65 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 34.96 | 42.57 |
| KRH48855 | Soybean | nucleus, plastid | 35.77 | 38.26 |
| TraesCS2D01G453400.1 | Wheat | cytosol | 28.46 | 38.04 |
| TraesCS2D01G453200.1 | Wheat | cytosol | 28.46 | 37.63 |
| KRH66418 | Soybean | plastid | 34.96 | 37.39 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 30.08 | 37.37 |
| CDY48248 | Canola | nucleus | 27.64 | 37.36 |
| Bra004855.1-P | Field mustard | cytosol | 27.64 | 37.36 |
| CDX74676 | Canola | cytosol | 27.64 | 37.36 |
| TraesCS2D01G453500.1 | Wheat | cytosol | 30.08 | 37.0 |
| CDY41184 | Canola | cytosol | 26.02 | 36.36 |
| Bra007517.1-P | Field mustard | cytosol | 26.02 | 36.36 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 26.02 | 36.36 |
| PGSC0003DMT400004241 | Potato | cytosol | 29.27 | 36.36 |
| Bra000358.1-P | Field mustard | nucleus | 27.64 | 36.17 |
| CDX83422 | Canola | nucleus | 27.64 | 36.17 |
| AT2G44670.1 | Thale cress | cytosol, nucleus, plastid | 26.83 | 35.48 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 39.84 | 35.25 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 26.83 | 35.11 |
| TraesCS2D01G453800.1 | Wheat | cytosol | 27.64 | 34.69 |
| TraesCS2D01G454900.1 | Wheat | cytosol | 26.83 | 34.38 |
| CDY30481 | Canola | nucleus | 26.02 | 34.04 |
| Bra037639.1-P | Field mustard | nucleus | 26.02 | 34.04 |
| CDY23451 | Canola | nucleus | 26.02 | 34.04 |
| TraesCS2D01G454700.1 | Wheat | extracellular | 26.02 | 33.33 |
| TraesCS2D01G454800.1 | Wheat | extracellular | 26.02 | 33.33 |
| TraesCS2D01G453100.1 | Wheat | cytosol | 29.27 | 32.73 |
| TraesCS2D01G453700.1 | Wheat | cytosol | 25.2 | 32.29 |
| TraesCS2D01G454100.1 | Wheat | cytosol | 25.2 | 32.29 |
| TraesCS2D01G453600.1 | Wheat | cytosol | 24.39 | 32.26 |
| TraesCS2D01G454600.1 | Wheat | cytosol, extracellular | 25.2 | 31.96 |
| TraesCS2D01G454300.1 | Wheat | cytosol | 24.39 | 31.25 |
| TraesCS2D01G454500.1 | Wheat | cytosol | 24.39 | 31.25 |
| TraesCS2D01G454200.1 | Wheat | cytosol | 24.39 | 31.25 |
| TraesCS2D01G454000.1 | Wheat | cytosol | 24.39 | 31.25 |
| TraesCS2D01G453900.1 | Wheat | cytosol | 24.39 | 31.25 |
| TraesCS2D01G454400.1 | Wheat | cytosol | 23.58 | 30.21 |
| TraesCS2D01G455100.1 | Wheat | nucleus | 31.71 | 30.0 |
| TraesCS6D01G242900.1 | Wheat | cytosol, extracellular | 26.02 | 29.91 |
| TraesCS6D01G242500.1 | Wheat | nucleus | 34.15 | 27.63 |
| TraesCS2D01G453300.1 | Wheat | cytosol | 26.02 | 25.6 |
| TraesCS2D01G455200.1 | Wheat | plastid | 34.96 | 24.86 |
| TraesCS7D01G381700.1 | Wheat | cytosol | 25.2 | 23.31 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 38.21 | 18.88 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G455000.1 | EnsemblPlantsGene:TraesCS2D01G455000 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF69 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | MapMan:27.3.3 | : |
Description
No Description!
Coordinates
chr2D:+:563142820..563143423
Molecular Weight (calculated)
14063.6 Da
IEP (calculated)
6.495
GRAVY (calculated)
-0.859
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIYGDLEAG CLSHSVSPIK PASPPRKAGP GRLFCDPCDD AGELLGHHHY LDICFSCRKL LAGNKDIFMY RGDTPFCSEE CRQEQIEIDE AREKRSNQTG
101: RAEEQRQRQQ QKQSTPRIPV WAW
101: RAEEQRQRQQ QKQSTPRIPV WAW
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.