Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024966.1-P | Field mustard | nucleus | 93.99 | 97.18 |
| CDX77736 | Canola | nucleus | 94.54 | 94.02 |
| CDY40586 | Canola | nucleus | 72.13 | 83.54 |
| AT5G47060.2 | Thale cress | nucleus | 79.78 | 82.49 |
| CDY12406 | Canola | nucleus | 80.33 | 80.77 |
| CDY43446 | Canola | nucleus | 74.86 | 78.29 |
| CDY72627 | Canola | cytosol, nucleus | 71.58 | 77.06 |
| CDY38416 | Canola | nucleus | 51.37 | 74.6 |
| CDX90460 | Canola | nucleus | 66.12 | 71.6 |
| CDY09610 | Canola | nucleus | 65.57 | 71.43 |
| CDX78788 | Canola | nucleus | 56.28 | 67.76 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 51.91 | 60.51 |
| KRH77270 | Soybean | nucleus | 50.27 | 58.97 |
| KRH28217 | Soybean | nucleus | 48.63 | 55.97 |
| KRH57558 | Soybean | plastid | 50.27 | 53.8 |
| Solyc06g061010.2.1 | Tomato | plastid | 39.89 | 53.68 |
| KRH04277 | Soybean | nucleus, plastid | 50.27 | 51.69 |
| PGSC0003DMT400068381 | Potato | nucleus | 40.44 | 50.34 |
| Solyc08g077480.2.1 | Tomato | nucleus | 48.63 | 47.09 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 23.5 | 45.74 |
| CDX83422 | Canola | nucleus | 23.5 | 45.74 |
| CDY23451 | Canola | nucleus | 22.95 | 44.68 |
| CDY30481 | Canola | nucleus | 22.95 | 44.68 |
| CDX74676 | Canola | cytosol | 21.86 | 43.96 |
| CDY48248 | Canola | nucleus | 21.86 | 43.96 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 20.77 | 43.18 |
| CDY41184 | Canola | cytosol | 20.77 | 43.18 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 33.88 | 43.06 |
| GSMUA_Achr11P... | Banana | cytosol | 32.79 | 41.96 |
Protein Annotations
| EnsemblPlants:CDY33512 | EnsemblPlantsGene:GSBRNA2T00054764001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY33512 | ProteinID:CDY33512.1 | SEG:seg |
| UniParc:UPI0004EF0B8C | UniProt:A0A078H7U9 | MapMan:27.3.3 | : | : | : |
Description
BnaA06g35610DBnaA06g35610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7U9]
Coordinates
chrLK032315:+:381189..382387
Molecular Weight (calculated)
21089.3 Da
IEP (calculated)
7.467
GRAVY (calculated)
-1.010
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSATKPYF IEEEEDDDLG SSLSEMEAGF SGNSGNPRHG VVLRPFSYTR MNSISRHTNY CYNNYPQSCY YNQYSVSSPR SVVSGRFHDF RFDHQQPHFL
101: DSCFLCKKPL GDNRDIYMCR GDTPFCSEEC RQEQIERDEA KEKKKNLSHS VKSAMRRKEQ RSSSSSPTRS RDYAFHNGTV AAA
101: DSCFLCKKPL GDNRDIYMCR GDTPFCSEEC RQEQIERDEA KEKKKNLSHS VKSAMRRKEQ RSSSSSPTRS RDYAFHNGTV AAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.