Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g061010.2.1 | Tomato | plastid | 91.73 | 89.71 |
| PGSC0003DMT400068381 | Potato | nucleus | 58.65 | 53.06 |
| KRH77270 | Soybean | nucleus | 56.39 | 48.08 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 55.64 | 47.13 |
| KRH57558 | Soybean | plastid | 60.15 | 46.78 |
| PGSC0003DMT400004241 | Potato | cytosol | 34.59 | 46.46 |
| KRH28217 | Soybean | nucleus | 54.14 | 45.28 |
| KRH04277 | Soybean | nucleus, plastid | 57.89 | 43.26 |
| PGSC0003DMT400004695 | Potato | nucleus | 53.38 | 39.01 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 37.59 | 34.72 |
| GSMUA_Achr11P... | Banana | cytosol | 36.09 | 33.57 |
Protein Annotations
| EntrezGene:102600983 | MapMan:27.3.3 | Gene3D:3.30.50.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR007650 | InterPro:IPR013088 | UniProt:M1CIZ4 | PFAM:PF04570 | EnsemblPlantsGene:PGSC0003DMG400026592 | PGSC:PGSC0003DMG400026592 |
| EnsemblPlants:PGSC0003DMT400068383 | PFscan:PS51795 | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 | UniParc:UPI0002967BF7 | RefSeq:XP_006361165.1 |
| InterPro:Zf-FLZ_dom | InterPro:Znf_NHR/GATA | SEG:seg | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400026592]
Coordinates
chr6:-:44340558..44341857
Molecular Weight (calculated)
15133.7 Da
IEP (calculated)
9.236
GRAVY (calculated)
-0.889
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSATRRGPF CYTALQRKSS LTSLSSSSSS SMSSPRFAGG RKYYDTTRFQ QQQQPHFLDA CFLCNKPLGY NRDIFMYRGD TPFCSEECRQ EQIDMDEAKE
101: KKINLSASKA LREKDQTTSP KNYHFPRGTV AAA
101: KKINLSASKA LREKDQTTSP KNYHFPRGTV AAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.