Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g077480.2.1 | Tomato | nucleus | 91.21 | 87.83 |
| PGSC0003DMT400068381 | Potato | nucleus | 46.7 | 57.82 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 48.35 | 56.05 |
| KRH77270 | Soybean | nucleus | 47.8 | 55.77 |
| KRH28217 | Soybean | nucleus | 47.25 | 54.09 |
| PGSC0003DMT400068383 | Potato | plastid | 39.01 | 53.38 |
| KRH57558 | Soybean | plastid | 47.25 | 50.29 |
| KRH04277 | Soybean | nucleus, plastid | 47.8 | 48.88 |
| PGSC0003DMT400004241 | Potato | cytosol | 23.63 | 43.43 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 26.92 | 34.03 |
| GSMUA_Achr11P... | Banana | cytosol | 25.82 | 32.87 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400004695 | EnsemblPlantsGene:PGSC0003DMG400001858 | EntrezGene:102583567 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | PGSC:PGSC0003DMG400001858 | RefSeq:XP_006358618.1 |
| SEG:seg | UniParc:UPI000295135A | UniProt:M0ZNU0 | MapMan:27.3.3 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400001858]
Coordinates
chr8:+:50455022..50456844
Molecular Weight (calculated)
20899.4 Da
IEP (calculated)
9.221
GRAVY (calculated)
-1.062
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPSTTRRR RPCFIEEDDG LVSLAETQPE FSGNNNQNHN NNINNNKNLN LIYRPLYYTR RNSMKNLSSS SPSSLLSPRS VISAGKYCDG RFDEPHHYFL
101: DACFLCKKRI GDNSDIFMYR GDTPFCSEEC RQLQIEKDET KDRKRNISSI KAMRKKEQKQ QSTSPNKTSE DYPLRPGTVA AA
101: DACFLCKKRI GDNSDIFMYR GDTPFCSEEC RQLQIEKDET KDRKRNISSI KAMRKKEQKQ QSTSPNKTSE DYPLRPGTVA AA
001: MEVSMRKPYF IEEEDDGFVS LSEMEAGVSS PSCYNYPQSY YYNHHHHQYS VSSPRSGKFH DFRFDNSYYG YGQPHFLDSC FLCKKRLGDN RDIFMYRGDT
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VZM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.