Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036409_P001 | Maize | cytosol | 70.59 | 82.44 |
| Os06t0714800-01 | Rice | cytosol | 56.86 | 63.97 |
| TraesCS7B01G288100.2 | Wheat | cytosol | 45.1 | 53.91 |
| TraesCS7D01G381700.1 | Wheat | cytosol | 46.41 | 53.38 |
| TraesCS7A01G385100.1 | Wheat | cytosol | 45.1 | 52.27 |
| KXG19161 | Sorghum | cytosol | 35.95 | 45.45 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 27.45 | 43.3 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 26.14 | 40.82 |
| KXG30992 | Sorghum | cytosol | 21.57 | 35.11 |
| EES12744 | Sorghum | cytosol | 22.88 | 34.31 |
| EES12740 | Sorghum | cytosol | 24.18 | 33.95 |
| EES12745 | Sorghum | cytosol | 21.57 | 33.67 |
| EES12739 | Sorghum | vacuole | 20.91 | 31.37 |
| HORVU0Hr1G021850.2 | Barley | plastid | 45.1 | 30.94 |
| KXG30991 | Sorghum | nucleus | 20.91 | 29.09 |
| EES12737 | Sorghum | cytosol, mitochondrion, nucleus | 19.61 | 23.62 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 18.3 | 21.71 |
| EES05711 | Sorghum | cytosol | 18.3 | 21.54 |
| EES09600 | Sorghum | nucleus | 18.95 | 20.14 |
| EES08321 | Sorghum | nucleus | 18.3 | 19.44 |
| KXG27001 | Sorghum | cytosol | 21.57 | 19.3 |
| EES05712 | Sorghum | nucleus, plastid | 16.34 | 16.89 |
| EES08324 | Sorghum | cytosol | 19.61 | 14.93 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 17.65 | 11.64 |
Protein Annotations
| EnsemblPlants:EER88959 | EnsemblPlantsGene:SORBI_3010G265600 | EntrezGene:8069190 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF30 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:EER88959 | ProteinID:EER88959.1 |
| RefSeq:XP_002437592.1 | SEG:seg | unigene:Sbi.10592 | UniParc:UPI0001A891BA | UniProt:C5Z1V0 | MapMan:27.3.3 |
Description
hypothetical protein
Coordinates
chr10:+:60120186..60121598
Molecular Weight (calculated)
17201.2 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.851
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MKETNKVTAE AMEEEEEEEE EEERYVKVGT RFYRVTMRPN GGGGAGDAVA RRRRRLHYLE SCYLCKQSIA CDRDVFMYKG DAAFCSEDCR DDQMDMDEAL
101: HAAARRHRLL QRSPASASSQ SSQAAASTRP PPVMRRRPTI ANLAARNPPV AAS
101: HAAARRHRLL QRSPASASSQ SSQAAASTRP PPVMRRRPTI ANLAARNPPV AAS
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.