Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G288100.2 | Wheat | cytosol | 47.53 | 82.81 |
| TraesCS7A01G385100.1 | Wheat | cytosol | 46.64 | 78.79 |
| TraesCS7D01G381700.1 | Wheat | cytosol | 46.19 | 77.44 |
| Os06t0714800-01 | Rice | cytosol | 34.98 | 57.35 |
| Zm00001d036409_P001 | Maize | cytosol | 30.04 | 51.15 |
| EER88959 | Sorghum | nucleus | 30.94 | 45.1 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 19.28 | 44.33 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 18.39 | 41.84 |
| HORVU2Hr1G104980.1 | Barley | cytosol | 14.8 | 34.38 |
| HORVU2Hr1G105060.1 | Barley | cytosol | 14.8 | 34.38 |
| HORVU2Hr1G105010.1 | Barley | cytosol | 14.35 | 33.33 |
| HORVU2Hr1G105050.1 | Barley | cytosol | 14.8 | 33.0 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 16.59 | 30.08 |
| HORVU6Hr1G066670.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 13.9 | 28.97 |
| HORVU2Hr1G104950.3 | Barley | nucleus | 17.49 | 27.27 |
| HORVU6Hr1G066540.2 | Barley | nucleus | 17.94 | 26.32 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 14.8 | 22.45 |
| HORVU2Hr1G105100.2 | Barley | cytosol | 10.76 | 22.43 |
| HORVU2Hr1G105140.2 | Barley | mitochondrion, plastid | 15.7 | 21.47 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 21.97 | 21.12 |
| HORVU2Hr1G105090.1 | Barley | cytosol, plastid | 13.45 | 12.82 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G021850.2 | EnsemblPlantsGene:HORVU0Hr1G021850 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF30 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000B465BE7 | UniProt:A0A287E6X4 | MapMan:27.3.3 |
Description
No Description!
Coordinates
chrchrUn:-:113429091..113430425
Molecular Weight (calculated)
24120.4 Da
IEP (calculated)
10.657
GRAVY (calculated)
-0.523
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: VTKHNQLRMQ TDKNKSGLAS LASVVYNPGL PRSPPSAQAS VPRHTTRART HALSTSQEQE QRRPCHACAS IRMGEEAAST AAPASLSSSS SSSSSSLLAA
101: AAVKGDEERY VKVASRFFRV RPGGLARRHH FLDSCFLCKA SISRDRDIFM YKGDEAFCGE ECRQEQMAMD EALHAVARRR HKQVTAEQAA STARREATAA
201: SMAHRRPTVA NLGAVARTPV AAS
101: AAVKGDEERY VKVASRFFRV RPGGLARRHH FLDSCFLCKA SISRDRDIFM YKGDEAFCGE ECRQEQMAMD EALHAVARRR HKQVTAEQAA STARREATAA
201: SMAHRRPTVA NLGAVARTPV AAS
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.