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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:
  • plastid 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid, secretory
Any Predictor:cytosol, plastid, secretory
iPSORT:plastid
MultiLoc:cytosol
TargetP:secretory
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G242900.1 Wheat cytosol, extracellular 86.92 86.92
TraesCS6B01G289400.1 Wheat extracellular 86.92 86.92
TraesCS6A01G262100.1 Wheat extracellular, plastid 85.05 85.05
Os02t0687200-01 Rice plastid 60.75 61.32
KXG30991 Sorghum nucleus 54.21 52.73
HORVU2Hr1G104980.1 Barley cytosol 41.12 45.83
Zm00001d017648_P001 Maize nucleus 48.6 45.61
HORVU2Hr1G105010.1 Barley cytosol 38.32 42.71
HORVU2Hr1G105060.1 Barley cytosol 37.38 41.67
HORVU2Hr1G105050.1 Barley cytosol 37.38 40.0
GSMUA_Achr7P05660_001 Banana cytosol 28.04 30.93
GSMUA_Achr4P19900_001 Banana cytosol 28.04 30.61
HORVU2Hr1G105100.2 Barley cytosol 28.04 28.04
HORVU2Hr1G104960.1 Barley cytosol, nucleus, plastid 28.97 25.2
HORVU2Hr1G105140.2 Barley mitochondrion, plastid 37.38 24.54
HORVU2Hr1G104950.3 Barley nucleus 29.91 22.38
HORVU6Hr1G066610.2 Barley cytosol, nucleus 29.91 21.77
HORVU6Hr1G066540.2 Barley nucleus 30.84 21.71
HORVU2Hr1G105090.1 Barley cytosol, plastid 38.32 17.52
GSMUA_Achr3P12600_001 Banana cytosol, mitochondrion, plasma membrane, plastid 31.78 14.66
HORVU0Hr1G021850.2 Barley plastid 28.97 13.9
Protein Annotations
EnsemblPlants:HORVU6Hr1G066670.1EnsemblPlantsGene:HORVU6Hr1G066670InterPro:IPR007650InterPro:Zf-FLZ_domPANTHER:PTHR33059PANTHER:PTHR33059:SF14
PFAM:PF04570PFscan:PS51795SEG:segUniParc:UPI000B4867D9UniProt:A0A287UHL0MapMan:27.3.3
Description
No Description!
Coordinates
chrchr6H:+:461113318..461113804
Molecular Weight (calculated)
11600.7 Da
IEP (calculated)
8.347
GRAVY (calculated)
-0.429
Length
107 amino acids
Sequence
(BLAST)
001: PPSSSASSSS LFAIVPLHGG GATSRHAMDA CYLCGKPLPR NFDIFMYRGD TPFCSEECRA VQIDTDEVRE RIKTKILRER AARNEHRHGA AASERSITPA
101: GNVPVAS
Best Arabidopsis Sequence Match ( AT5G47060.1 )
(BLAST)
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.