Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30991 | Sorghum | nucleus | 75.44 | 78.18 |
| Os02t0687200-01 | Rice | plastid | 49.12 | 52.83 |
| TraesCS6B01G289400.1 | Wheat | extracellular | 46.49 | 49.53 |
| HORVU6Hr1G066670.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 45.61 | 48.6 |
| TraesCS6D01G242900.1 | Wheat | cytosol, extracellular | 45.61 | 48.6 |
| TraesCS6A01G262100.1 | Wheat | extracellular, plastid | 43.86 | 46.73 |
| Zm00001d002521_P001 | Maize | cytosol, extracellular | 32.46 | 43.02 |
| Zm00001d026028_P001 | Maize | cytosol | 35.09 | 41.67 |
| Zm00001d002522_P001 | Maize | cytosol | 36.84 | 41.58 |
| Zm00001d002520_P001 | Maize | cytosol | 35.96 | 41.0 |
| Zm00001d026029_P001 | Maize | extracellular | 35.96 | 39.42 |
| Zm00001d017646_P001 | Maize | cytosol, mitochondrion | 29.82 | 37.78 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 25.44 | 29.59 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 24.56 | 28.87 |
| Zm00001d051492_P001 | Maize | cytosol | 26.32 | 24.19 |
| Zm00001d002523_P001 | Maize | nucleus | 24.56 | 21.88 |
| Zm00001d036409_P001 | Maize | cytosol | 24.56 | 21.37 |
| Zm00001d017647_P001 | Maize | nucleus | 27.19 | 20.39 |
| Zm00001d051495_P001 | Maize | nucleus | 27.19 | 20.0 |
| Zm00001d026026_P001 | Maize | plastid | 26.32 | 18.75 |
| Zm00001d002530_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 24.56 | 18.54 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 29.82 | 14.66 |
Protein Annotations
| EntrezGene:100279084 | MapMan:27.3.3 | ProteinID:AQK73625.1 | UniProt:B6UHK2 | EMBL:EU976717 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR007650 | PFAM:PF04570 | PFscan:PS51795 | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF14 | UniParc:UPI000182FE26 | InterPro:Zf-FLZ_dom | EnsemblPlantsGene:Zm00001d017648 | EnsemblPlants:Zm00001d017648_P001 | EnsemblPlants:Zm00001d017648_T001 |
| SEG:seg | : | : | : | : | : |
Description
OSJNBa0013K16.16 protein; protein
Coordinates
chr5:-:203049052..203049396
Molecular Weight (calculated)
12512.8 Da
IEP (calculated)
8.344
GRAVY (calculated)
-0.551
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASSSSFSS FFGIEPLDGG DGDAYRRAMD ACSLCGKRLA GDRDIFMYRG DTPFCSEECR HHQMARDDFG AALKTEPRPA RRGERRRRRH EAPAAAAAEP
101: ARVPLAPNVP AVVI
101: ARVPLAPNVP AVVI
001: MEVSMRKPYF IEEEDDGFVS LSEMEAGVSS PSCYNYPQSY YYNHHHHQYS VSSPRSGKFH DFRFDNSYYG YGQPHFLDSC FLCKKRLGDN RDIFMYRGDT
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VZM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.