Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05712 | Sorghum | nucleus, plastid | 88.82 | 91.22 |
| Zm00001d051495_P001 | Maize | nucleus | 86.18 | 84.52 |
| Os02t0686800-01 | Rice | cytosol | 61.84 | 64.38 |
| HORVU6Hr1G066540.2 | Barley | nucleus | 56.58 | 56.58 |
| TraesCS6A01G261800.1 | Wheat | nucleus | 55.92 | 55.92 |
| TraesCS6D01G242500.1 | Wheat | nucleus | 55.92 | 55.92 |
| TraesCS6B01G289100.1 | Wheat | nucleus | 55.26 | 55.26 |
| Zm00001d026028_P001 | Maize | cytosol | 23.03 | 36.46 |
| Zm00001d017646_P001 | Maize | cytosol, mitochondrion | 21.05 | 35.56 |
| Zm00001d002523_P001 | Maize | nucleus | 29.61 | 35.16 |
| Zm00001d002520_P001 | Maize | cytosol | 22.37 | 34.0 |
| Zm00001d002521_P001 | Maize | cytosol, extracellular | 19.08 | 33.72 |
| Zm00001d026029_P001 | Maize | extracellular | 23.03 | 33.65 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 21.05 | 32.99 |
| Zm00001d002522_P001 | Maize | cytosol | 21.71 | 32.67 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 20.39 | 31.63 |
| Zm00001d051492_P001 | Maize | cytosol | 24.34 | 29.84 |
| Zm00001d017648_P001 | Maize | nucleus | 20.39 | 27.19 |
| Zm00001d002530_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 25.66 | 25.83 |
| Zm00001d026026_P001 | Maize | plastid | 25.0 | 23.75 |
| Zm00001d036409_P001 | Maize | cytosol | 19.08 | 22.14 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 25.0 | 16.38 |
Protein Annotations
| EnsemblPlants:Zm00001d017647_P001 | EnsemblPlants:Zm00001d017647_T001 | EnsemblPlantsGene:Zm00001d017647 | EntrezGene:103627565 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| ncoils:Coil | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF66 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:AQK73624.1 |
| SEG:seg | UniParc:UPI000221CA9A | UniProt:A0A1D6HG74 | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr5:-:202990864..202992025
Molecular Weight (calculated)
17049.9 Da
IEP (calculated)
8.134
GRAVY (calculated)
-0.930
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSSYFHA FGNPDLAAVV SGDGGSAQAH RPRRSTDGAK AEDGRSPTTT TARRAPSMFC VPDTEAEEPN GFLDECTLCR KALCGDIFMY RGDTPFCSDD
101: CRREQIDMDR IRHRRKKQQA LIAQQQQQQQ AAAAAAMAQR DRRTQRQLQP QH
101: CRREQIDMDR IRHRRKKQQA LIAQQQQQQQ AAAAAAMAQR DRRTQRQLQP QH
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.