Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05712 | Sorghum | nucleus, plastid | 83.23 | 87.16 |
| Zm00001d017647_P001 | Maize | nucleus | 84.52 | 86.18 |
| Os02t0686800-01 | Rice | cytosol | 61.94 | 65.75 |
| HORVU6Hr1G066540.2 | Barley | nucleus | 55.48 | 56.58 |
| TraesCS6A01G261800.1 | Wheat | nucleus | 54.84 | 55.92 |
| TraesCS6D01G242500.1 | Wheat | nucleus | 54.84 | 55.92 |
| TraesCS6B01G289100.1 | Wheat | nucleus | 54.19 | 55.26 |
| Zm00001d017646_P001 | Maize | cytosol, mitochondrion | 20.65 | 35.56 |
| Zm00001d026028_P001 | Maize | cytosol | 21.94 | 35.42 |
| Zm00001d002521_P001 | Maize | cytosol, extracellular | 19.35 | 34.88 |
| Zm00001d002523_P001 | Maize | nucleus | 28.39 | 34.38 |
| Zm00001d026029_P001 | Maize | extracellular | 22.58 | 33.65 |
| Zm00001d002520_P001 | Maize | cytosol | 21.29 | 33.0 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 20.65 | 32.99 |
| Zm00001d002522_P001 | Maize | cytosol | 20.65 | 31.68 |
| Zm00001d051492_P001 | Maize | cytosol | 25.16 | 31.45 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 19.35 | 30.61 |
| Zm00001d017648_P001 | Maize | nucleus | 20.0 | 27.19 |
| Zm00001d002530_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 24.52 | 25.17 |
| Zm00001d026026_P001 | Maize | plastid | 23.23 | 22.5 |
| Zm00001d036409_P001 | Maize | cytosol | 18.06 | 21.37 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 23.87 | 15.95 |
Protein Annotations
| EnsemblPlants:Zm00001d051495_P001 | EnsemblPlants:Zm00001d051495_T001 | EnsemblPlantsGene:Zm00001d051495 | EntrezGene:103653929 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| ncoils:Coil | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF66 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:AQK54329.1 |
| SEG:seg | UniParc:UPI0002213C95 | UniProt:K7U358 | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr4:+:160374916..160375974
Molecular Weight (calculated)
17531.3 Da
IEP (calculated)
7.833
GRAVY (calculated)
-1.030
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSSSYFH ASGNPDFAAV FSDGGGSAQA HRPRRSTDDG TKAEDGRSPT TARRPPSAFC VPDTEAEEPN SFLDECTLCR KALCGDIFMY RGDTPFCSDD
101: CRREQIEMDR IRHRRKKQHA LIQQQLQLQQ QQQAAAAAMA QKDQRAQRRQ LQPQH
101: CRREQIEMDR IRHRRKKQHA LIQQQLQLQQ QQQAAAAAMA QKDQRAQRRQ LQPQH
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.