Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002530_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 80.62 | 85.43 |
| KXG27001 | Sorghum | cytosol | 90.62 | 84.8 |
| Os04t0585700-01 | Rice | cytosol | 68.75 | 73.33 |
| TraesCS2B01G476900.1 | Wheat | plastid | 68.75 | 64.33 |
| TraesCS2D01G455200.1 | Wheat | plastid | 68.75 | 63.58 |
| Zm00001d017646_P001 | Maize | cytosol, mitochondrion | 27.5 | 48.89 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 25.0 | 41.24 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 23.75 | 38.78 |
| Zm00001d002523_P001 | Maize | nucleus | 27.5 | 34.38 |
| Zm00001d026028_P001 | Maize | cytosol | 20.0 | 33.33 |
| Zm00001d002520_P001 | Maize | cytosol | 20.62 | 33.0 |
| Zm00001d002521_P001 | Maize | cytosol, extracellular | 17.5 | 32.56 |
| Zm00001d026029_P001 | Maize | extracellular | 20.0 | 30.77 |
| Zm00001d002522_P001 | Maize | cytosol | 19.38 | 30.69 |
| Zm00001d051492_P001 | Maize | cytosol | 20.62 | 26.61 |
| Zm00001d017648_P001 | Maize | nucleus | 18.75 | 26.32 |
| Zm00001d017647_P001 | Maize | nucleus | 23.75 | 25.0 |
| Zm00001d036409_P001 | Maize | cytosol | 19.38 | 23.66 |
| Zm00001d051495_P001 | Maize | nucleus | 22.5 | 23.23 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 27.5 | 18.97 |
Protein Annotations
| EMBL:BT040767 | EnsemblPlants:Zm00001d026026_P001 | EnsemblPlants:Zm00001d026026_T001 | EnsemblPlantsGene:Zm00001d026026 | EntrezGene:100273313 | InterPro:IPR007650 |
| InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF35 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:AQK45335.1 |
| SEG:seg | UniParc:UPI00017B78EE | UniProt:B4FUH9 | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr10:-:136307170..136309172
Molecular Weight (calculated)
16192.1 Da
IEP (calculated)
8.667
GRAVY (calculated)
-0.528
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVGLGGAGS SGRGGGGGRS GSGGGRDSPF ALGGGGASAA AWTRLVSSGV EDELVAASGG RGGGGGRAGA RAGGLPQGHF LDACFLCRKP LPSNRDIFMY
101: RGDIPFCTEE CRTEQIEMDE EMERKESTQK KKLAPRAPSP KDVESAPRPP KARAGSILAG
101: RGDIPFCTEE CRTEQIEMDE EMERKESTQK KKLAPRAPSP KDVESAPRPP KARAGSILAG
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.