Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12745 | Sorghum | cytosol | 89.0 | 90.82 |
| Os04t0586200-01 | Rice | cytosol | 79.0 | 75.96 |
| EES12744 | Sorghum | cytosol | 77.0 | 75.49 |
| Zm00001d026029_P001 | Maize | extracellular | 71.0 | 68.27 |
| TraesCS2A01G453400.1 | Wheat | cytosol | 71.0 | 66.98 |
| TraesCS2B01G474700.1 | Wheat | cytosol | 70.0 | 66.67 |
| TraesCS2D01G453100.1 | Wheat | cytosol | 70.0 | 63.64 |
| Zm00001d026028_P001 | Maize | cytosol | 60.0 | 62.5 |
| Zm00001d002521_P001 | Maize | cytosol, extracellular | 52.0 | 60.47 |
| Zm00001d002522_P001 | Maize | cytosol | 57.0 | 56.44 |
| HORVU2Hr1G105100.2 | Barley | cytosol | 52.0 | 48.6 |
| Zm00001d017646_P001 | Maize | cytosol, mitochondrion | 34.0 | 37.78 |
| Zm00001d017648_P001 | Maize | nucleus | 41.0 | 35.96 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 32.0 | 32.65 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 31.0 | 31.96 |
| Zm00001d002523_P001 | Maize | nucleus | 36.0 | 28.12 |
| Zm00001d036409_P001 | Maize | cytosol | 33.0 | 25.19 |
| Zm00001d017647_P001 | Maize | nucleus | 34.0 | 22.37 |
| Zm00001d051495_P001 | Maize | nucleus | 33.0 | 21.29 |
| Zm00001d002530_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 32.0 | 21.19 |
| Zm00001d051492_P001 | Maize | cytosol | 26.0 | 20.97 |
| Zm00001d026026_P001 | Maize | plastid | 33.0 | 20.62 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 34.0 | 14.66 |
Protein Annotations
| EntrezGene:100274866 | MapMan:27.3.3 | Gene3D:3.30.50.10 | UniProt:B6SKM0 | EMBL:EU953285 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR007650 | InterPro:IPR013088 | ProteinID:ONM14599.1 | PFAM:PF04570 |
| PFscan:PS51795 | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF7 | UniParc:UPI000182B4EB | InterPro:Zf-FLZ_dom | EnsemblPlantsGene:Zm00001d002520 |
| EnsemblPlants:Zm00001d002520_P001 | EnsemblPlants:Zm00001d002520_T001 | InterPro:Znf_NHR/GATA | SEG:seg | : | : |
Description
OSJNBa0013K16.16 protein; protein
Coordinates
chr2:+:14677835..14678137
Molecular Weight (calculated)
10838.6 Da
IEP (calculated)
7.868
GRAVY (calculated)
-0.525
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MATSVACAFF FDAEPLGEPG RHALDACALC AKPLSRNSDI FMYKGDTPFC SEDCRYEQMH HDAAYARQAA SSRRKQQQSQ SQRSRGASSV GAKADVSVAS
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.