Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88959 | Sorghum | nucleus | 82.44 | 70.59 |
| Os06t0714800-01 | Rice | cytosol | 63.36 | 61.03 |
| TraesCS7B01G288100.2 | Wheat | cytosol | 53.44 | 54.69 |
| TraesCS7D01G381700.1 | Wheat | cytosol | 54.2 | 53.38 |
| TraesCS7A01G385100.1 | Wheat | cytosol | 53.44 | 53.03 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 31.3 | 42.27 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 29.77 | 39.8 |
| Zm00001d002521_P001 | Maize | cytosol, extracellular | 24.43 | 37.21 |
| Zm00001d017646_P001 | Maize | cytosol, mitochondrion | 23.66 | 34.44 |
| Zm00001d002520_P001 | Maize | cytosol | 25.19 | 33.0 |
| Zm00001d026028_P001 | Maize | cytosol | 22.9 | 31.25 |
| Zm00001d026029_P001 | Maize | extracellular | 24.43 | 30.77 |
| HORVU0Hr1G021850.2 | Barley | plastid | 51.15 | 30.04 |
| Zm00001d002522_P001 | Maize | cytosol | 21.37 | 27.72 |
| Zm00001d017648_P001 | Maize | nucleus | 21.37 | 24.56 |
| Zm00001d002530_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 25.95 | 22.52 |
| Zm00001d002523_P001 | Maize | nucleus | 21.37 | 21.88 |
| Zm00001d026026_P001 | Maize | plastid | 23.66 | 19.38 |
| Zm00001d017647_P001 | Maize | nucleus | 22.14 | 19.08 |
| Zm00001d051495_P001 | Maize | nucleus | 21.37 | 18.06 |
| Zm00001d051492_P001 | Maize | cytosol | 16.79 | 17.74 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 21.37 | 12.07 |
Protein Annotations
| EnsemblPlants:Zm00001d036409_P001 | EnsemblPlants:Zm00001d036409_T001 | EnsemblPlantsGene:Zm00001d036409 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF30 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:AQK80938.1 | SEG:seg | UniParc:UPI000220B73B |
| UniProt:A0A1D6LMZ1 | MapMan:27.3.3 | : | : | : | : |
Description
OSJNBa0013K16.15 protein; protein
Coordinates
chr6:-:87176109..87177459
Molecular Weight (calculated)
14630.2 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.679
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDEEEEGY VKVGTRFYRV AMRPSGAVAR HRLHYLESCY LCKESIARDR DVFMYKGDAA FCSEDCRDEQ KDMDEALHAA ARRHRLLRSP SASSSSQAAA
101: EAAASTRPPP VMRRRPTIAN LAARNPPVAA S
101: EAAASTRPPP VMRRRPTIAN LAARNPPVAA S
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.