Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G242500.1 | Wheat | nucleus | 98.03 | 98.03 |
| TraesCS6B01G289100.1 | Wheat | nucleus | 97.37 | 97.37 |
| TraesCS6A01G261800.1 | Wheat | nucleus | 97.37 | 97.37 |
| Os02t0686800-01 | Rice | cytosol | 57.89 | 60.27 |
| EES05712 | Sorghum | nucleus, plastid | 56.58 | 58.11 |
| Zm00001d017647_P001 | Maize | nucleus | 56.58 | 56.58 |
| Zm00001d051495_P001 | Maize | nucleus | 56.58 | 55.48 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 28.29 | 34.96 |
| HORVU2Hr1G105010.1 | Barley | cytosol | 21.05 | 33.33 |
| HORVU2Hr1G104980.1 | Barley | cytosol | 20.39 | 32.29 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 20.39 | 31.96 |
| HORVU6Hr1G066670.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 21.71 | 30.84 |
| HORVU2Hr1G104950.3 | Barley | nucleus | 28.95 | 30.77 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 19.08 | 29.59 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 28.29 | 29.25 |
| HORVU2Hr1G105060.1 | Barley | cytosol | 18.42 | 29.17 |
| HORVU2Hr1G105050.1 | Barley | cytosol | 18.42 | 28.0 |
| HORVU2Hr1G105140.2 | Barley | mitochondrion, plastid | 21.05 | 19.63 |
| HORVU2Hr1G105100.2 | Barley | cytosol | 13.16 | 18.69 |
| HORVU0Hr1G021850.2 | Barley | plastid | 26.32 | 17.94 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 23.68 | 15.52 |
| HORVU2Hr1G105090.1 | Barley | cytosol, plastid | 16.45 | 10.68 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G066540.2 | EnsemblPlantsGene:HORVU6Hr1G066540 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF66 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000296C115 | UniProt:M0VW38 | MapMan:27.3.3 |
Description
No Description!
Coordinates
chrchr6H:-:460577547..460578602
Molecular Weight (calculated)
16411.0 Da
IEP (calculated)
8.342
GRAVY (calculated)
-0.759
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFNASYFHA FGNPDFAAVF SDGSAQALRP NPSAGDGEGA SVKAEKGAAV ARPTTTPSSV TFAVPDEELG EAHHFLNECS RCRKGLTGDI FMYRGDTPFC
101: SEECRRKQIE TEKARHRRKK QNSPKAQAQA AAAAAAAAER ESAPQVRRPQ PQ
101: SEECRRKQIE TEKARHRRKK QNSPKAQAQA AAAAAAAAER ESAPQVRRPQ PQ
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.