Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G453200.1 | Wheat | cytosol | 53.37 | 93.55 |
| TraesCS2D01G453400.1 | Wheat | cytosol | 52.76 | 93.48 |
| TraesCS2B01G475000.1 | Wheat | cytosol | 51.53 | 84.0 |
| HORVU2Hr1G104980.1 | Barley | cytosol | 40.49 | 68.75 |
| HORVU2Hr1G105060.1 | Barley | cytosol | 39.88 | 67.71 |
| HORVU2Hr1G105050.1 | Barley | cytosol | 41.1 | 67.0 |
| Os04t0586100-01 | Rice | cytosol | 39.26 | 65.98 |
| HORVU2Hr1G105010.1 | Barley | cytosol | 38.65 | 65.62 |
| TraesCS2A01G453600.1 | Wheat | plastid | 76.07 | 63.92 |
| HORVU2Hr1G105100.2 | Barley | cytosol | 26.99 | 41.12 |
| HORVU6Hr1G066670.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 24.54 | 37.38 |
| HORVU2Hr1G105090.1 | Barley | cytosol, plastid | 50.92 | 35.47 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 19.02 | 31.63 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 18.4 | 30.93 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 20.86 | 27.64 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 20.25 | 22.45 |
| HORVU2Hr1G104950.3 | Barley | nucleus | 19.63 | 22.38 |
| HORVU6Hr1G066540.2 | Barley | nucleus | 19.63 | 21.05 |
| HORVU0Hr1G021850.2 | Barley | plastid | 21.47 | 15.7 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 20.25 | 14.22 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G105140.2 | EnsemblPlantsGene:HORVU2Hr1G105140 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR007650 |
| InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF7 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg |
| UniParc:UPI000B4833F6 | UniProt:A0A287JAP8 | MapMan:27.3.3 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:705704611..705705884
Molecular Weight (calculated)
17624.8 Da
IEP (calculated)
8.006
GRAVY (calculated)
-0.278
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLVRAAYR PCGLVPPTAT PTPVWFSTAT IYTQTPILFS TASTHPPTPG APKATTHCEA RYAHEHRMAC AFFFDAEPVG EPGVHALDAC ALCTKPLARD
101: SDIFMYRGDT PFCSDECRHE QMRLDAACAR QAAKAAAQSQ KQFSSGTGSG RARRQSWEVS VAS
101: SDIFMYRGDT PFCSDECRHE QMRLDAACAR QAAKAAAQSQ KQFSSGTGSG RARRQSWEVS VAS
001: MEVSMRKPYF IEEEDDGFVS LSEMEAGVSS PSCYNYPQSY YYNHHHHQYS VSSPRSGKFH DFRFDNSYYG YGQPHFLDSC FLCKKRLGDN RDIFMYRGDT
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VZM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.