Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G453900.1 | Wheat | cytosol | 92.71 | 90.82 |
| TraesCS2B01G475300.1 | Wheat | cytosol | 90.62 | 90.62 |
| TraesCS2D01G453800.1 | Wheat | cytosol | 90.62 | 88.78 |
| HORVU2Hr1G105060.1 | Barley | cytosol | 87.5 | 87.5 |
| HORVU2Hr1G105050.1 | Barley | cytosol | 84.38 | 81.0 |
| HORVU2Hr1G104980.1 | Barley | cytosol | 69.79 | 69.79 |
| HORVU2Hr1G105100.2 | Barley | cytosol | 44.79 | 40.19 |
| HORVU2Hr1G105140.2 | Barley | mitochondrion, plastid | 65.62 | 38.65 |
| HORVU6Hr1G066670.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 42.71 | 38.32 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 33.33 | 32.65 |
| HORVU2Hr1G105090.1 | Barley | cytosol, plastid | 79.17 | 32.48 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 32.29 | 31.96 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 36.46 | 28.46 |
| HORVU2Hr1G104950.3 | Barley | nucleus | 32.29 | 21.68 |
| HORVU6Hr1G066540.2 | Barley | nucleus | 33.33 | 21.05 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 30.21 | 19.73 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 36.46 | 15.09 |
| HORVU0Hr1G021850.2 | Barley | plastid | 33.33 | 14.35 |
Protein Annotations
| EMBL:AK359375 | EnsemblPlants:HORVU2Hr1G105010.1 | EnsemblPlantsGene:HORVU2Hr1G105010 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF7 | PFAM:PF04570 | PFscan:PS51795 |
| UniParc:UPI00020056BE | UniProt:F2D665 | MapMan:27.3.3 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D665]
Coordinates
chrchr2H:+:705531258..705532006
Molecular Weight (calculated)
10712.6 Da
IEP (calculated)
7.801
GRAVY (calculated)
-0.501
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAASVACAFF FDAEPAGEPG KHALDACALC AKRLARDSDV FMYRGDTPFC SEECRREQMH LDAVSDRQAA RRLQRFTAEA ECHRGQRQSR KVSIAS
001: MTKISVGLQL VTRDSREKLN NIVIKSSLRL NRSNPNISEL CFLKTCHLCN KQLHQDKDVY MYRGDLGFCS RECRESQMLI DDRKELEAST KMMLASYRRC
101: NNGAGKSESR NLFDDLRRRR QLFIVP
101: NNGAGKSESR NLFDDLRRRR QLFIVP
Arabidopsis Description
At1g53885 [Source:UniProtKB/TrEMBL;Acc:Q8GWT6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.