Factsheet for Bra015563.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06688	Canola	mitochondrion	100.0	100.0
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	87.1	86.93
AT1G07220.1	Thale cress	mitochondrion	85.71	85.21
GSMUA_Achr7P06580_001	Banana	cytosol	40.48	65.18
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	58.53	63.58
Solyc06g076980.2.1	Tomato	unclear	57.74	62.85
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	57.34	62.42
VIT_06s0004g06630.t01	Wine grape	plasma membrane	55.16	59.91
KRH30306	Soybean	plastid	57.74	58.67
Os05t0149500-01	Rice	extracellular	31.75	54.05
TraesCS1B01G117800.1	Wheat	mitochondrion	49.4	51.34
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.4	51.23
Zm00001d024854_P001	Maize	mitochondrion	48.61	51.04
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	49.21	51.03
EES17717	Sorghum	mitochondrion	49.21	49.9
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	49.8	48.93
Bra007591.1-P	Field mustard	cytosol	35.32	41.4
Bra007592.1-P	Field mustard	cytosol	27.18	40.9
Bra007590.1-P	Field mustard	cytosol	39.09	40.12
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	38.89	39.36
Bra009709.1-P	Field mustard	plastid	39.68	37.45
Bra018021.1-P	Field mustard	golgi	39.68	37.04
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	37.9	36.04
Bra027639.1-P	Field mustard	mitochondrion	39.29	34.26
Bra039310.1-P	Field mustard	golgi, mitochondrion	28.37	33.1
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	36.31	28.68

Protein Annotations

EnsemblPlants:Bra015563.1	EnsemblPlants:Bra015563.1-P	EnsemblPlantsGene:Bra015563	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI0002544D8E	UniProt:M4DGE0	MapMan:35.2	:	:

Description

AT1G07220 (E=8e-271) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23850.1); Has 456 Blast hits to 452 proteins in 94 species: Archae - 0; Bacteria - 34; Metazoa - 198; Fungi - 90; Plants - 113; Viruses - 2; Other Eukaryotes - 19 (source: NCBI BLink).

Coordinates

chrA10:+:995713..997955

Molecular Weight (calculated)

58493.2 Da

IEP (calculated)

8.912

GRAVY (calculated)

-0.538

Length

504 amino acids

Sequence
(BLAST)

001: MGLRLRIRLP HKSSPRTPSH LLLCVLALCF FSFTAVILYK VDDFVAQTKT LAGHNLEPTP WHIFPRKSFT EATTYRILQC SYFSCPHNSA PEPNTLSSDS
101: GSGHRTHHQP QCPDVFRWIH RDLEPWLKTG VTKEHVEKAK ANAAFRVVIL SGKLYVDLYY ACVQSRMMFT VWGILQLLSK YPGMVPDVDM MFDCMDKPII
201: NRTEHQSFPA PLFRYCTNEA HLDIPFPDWS FWGWSETNLR PWEEEFRDIK KGSKRSSWDS KQPRAYWKGN PDVVSPIRME LMKCNHSRLW GAQIMRQNWA
301: EEAKGGFEQS KLSNQCNHRY KIYAEGYAWS VSLKYIMSCG SMTLIISPEY EDFFSRGLLP KENYWPVSPT DLCPSIKFAV DWGNANPSDA ETIGKRGQGY
401: MESISMNRVY DYMFHLINEY SKLQRFKPGK PPSAKEVCAG SLLCFAEQKE RDLLERSRAV PSMDRPCKLP GADRDRLERL IQRKKQTIED VRNMEMTRTE
501: RGSR

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.