Factsheet for TraesCS1A01G089800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

mitochondrion 2
golgi 1
endoplasmic reticulum 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G117800.1	Wheat	mitochondrion	96.91	97.11
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	90.33	90.33
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	94.65	89.67
Zm00001d024854_P001	Maize	mitochondrion	76.34	77.29
EES17717	Sorghum	mitochondrion	78.19	76.46
Os05t0149500-01	Rice	extracellular	44.86	73.65
GSMUA_Achr7P06580_001	Banana	cytosol	39.51	61.34
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	52.47	54.96
Solyc06g076980.2.1	Tomato	unclear	51.03	53.56
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	50.41	52.92
VIT_06s0004g06630.t01	Wine grape	plasma membrane	49.38	51.72
KRH30306	Soybean	plastid	51.65	50.6
CDY10259	Canola	mitochondrion	51.23	49.5
Bra015563.1-P	Field mustard	mitochondrion	51.03	49.21
CDY06688	Canola	mitochondrion	51.03	49.21
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	50.82	48.91
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	50.82	48.62
CDY09932	Canola	endoplasmic reticulum, golgi	50.41	48.61
AT1G07220.1	Thale cress	mitochondrion	50.41	48.32
TraesCS2A01G369000.1	Wheat	golgi	36.83	38.83
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	34.36	35.61
TraesCS2A01G368900.2	Wheat	plastid	40.12	35.14
TraesCS7A01G328500.1	Wheat	cytosol	37.65	32.33
TraesCS7A01G328300.1	Wheat	endoplasmic reticulum	25.72	29.14

Protein Annotations

EnsemblPlants:TraesCS1A01G089800.1	EnsemblPlantsGene:TraesCS1A01G089800	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686
SEG:seg	SMART:SM00672	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1A:+:79167267..79169087

Molecular Weight (calculated)

54310.7 Da

IEP (calculated)

8.573

GRAVY (calculated)

-0.393

Length

486 amino acids

Sequence
(BLAST)

001: MGGYTPEGGG GRAARPGRYP PLASLVVSTI AAFSAVIVIA VLHSAYDDAL SRTRTLLGHN LEPTPWHPFP HDKGRPPPHA ALRCASYLSC LPPLSQPKPA
101: AAVAANASRP RRCPSYFAAI RRDLAPWRRR DGGGGGITRA LVESGRHRAS MRVTITGGGT RLHVDLYYAC VQSRALFTVW SLLQLMRRYP GRVPDVDLML
201: DCMDRPAINR TEHTGEGAPP PPPLFRYCTT RDHFDIPFPD WSFWGWPETH IEPWTREFRS VKQGSRRVRW PDRVPTAYWK GNPDVASPLR LALLACNDTN
301: LWRAEIMRQN WEEEAKSGYQ NSKLSSQCTH RYKIYAEGFA WSVSLKYILS CGSMALLIDP LYQDFFSRGL EPRVNHWPVS TVGMCESIRD AVEWGNAHPE
401: EAERVGKRGQ RLMQELGMDT VYDYMLHLLT EYAALLDFRP APPHSSQEAC AGSVLCLADD HQRRFLEASA AYPATAGPCS MPPSDG

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.