Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G325300.1 | Wheat | cytosol | 54.42 | 97.78 |
| TraesCS7B01G229100.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 93.99 | 91.41 |
| HORVU0Hr1G021480.1 | Barley | cytosol, golgi, nucleus | 88.69 | 88.85 |
| TraesCS7A01G328300.1 | Wheat | endoplasmic reticulum | 50.0 | 65.97 |
| EES13178 | Sorghum | nucleus | 62.37 | 59.43 |
| Zm00001d052744_P001 | Maize | cytosol | 60.95 | 57.6 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 37.1 | 56.76 |
| Os08t0101800-01 | Rice | cytosol | 57.07 | 55.79 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 35.87 | 54.28 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 40.46 | 52.52 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 29.15 | 51.4 |
| TraesCS2A01G369000.1 | Wheat | golgi | 40.81 | 50.11 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 45.58 | 48.96 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 34.45 | 41.58 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 40.11 | 41.2 |
| TraesCS2A01G368900.2 | Wheat | plastid | 38.34 | 39.1 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 41.17 | 38.77 |
| TraesCS1A01G089800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 32.33 | 37.65 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G328500.1 | EnsemblPlantsGene:TraesCS7A01G328500 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:477808677..477817493
Molecular Weight (calculated)
63446.2 Da
IEP (calculated)
8.395
GRAVY (calculated)
-0.534
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSFLVPSGD KEEGAALVPP QEDGEAPRKV VVDGGKAADT AVERSSPSSP STATTTKKPW WKASLLSPTK GAVGLVIGGL VLLALLAGAR WIDLDASFLR
101: GNGSGTGGTS RRWRHPPRRQ RSSPPVPIPF SCGNGTSSSS TPLCRRPRGA MPPPAASPSP AAPERPVPRP PSCPDYFRHI HSDLAPWREK GISREAVEHG
201: QPNAAFRLTV VFGRAYVETY HRVFQTRDLF TQWGIAQLLA RYPGRVPDLD LMFNCEDMPE LRAADYPDTS AAPPLFRYCK DGTSVEVLFP DWSFWGWPEV
301: NIRPWGPLMK EIAKENARLP WPDREPYAFW KGNPHVSEAR RDLFRCSNDS AAGKDWNARL FALDWGAANR NGFKGSNLAE QCRYRYKIYV QGRSWSVSEK
401: YILACDSPML AIDTPFEDFF SRGLVAGRHY WPIDPRDKCR AVKFAVDWGN GHPALAQRMG KEGSGFAREE MSMDYVYDYM LHVLTQYAAL LRYKPTVPEN
501: AVELCPESMA CSAQGRDREF MMESREMYVA GYEPCTLPPP FTAEEEREMA AREEDVRRRV VKMEGR
101: GNGSGTGGTS RRWRHPPRRQ RSSPPVPIPF SCGNGTSSSS TPLCRRPRGA MPPPAASPSP AAPERPVPRP PSCPDYFRHI HSDLAPWREK GISREAVEHG
201: QPNAAFRLTV VFGRAYVETY HRVFQTRDLF TQWGIAQLLA RYPGRVPDLD LMFNCEDMPE LRAADYPDTS AAPPLFRYCK DGTSVEVLFP DWSFWGWPEV
301: NIRPWGPLMK EIAKENARLP WPDREPYAFW KGNPHVSEAR RDLFRCSNDS AAGKDWNARL FALDWGAANR NGFKGSNLAE QCRYRYKIYV QGRSWSVSEK
401: YILACDSPML AIDTPFEDFF SRGLVAGRHY WPIDPRDKCR AVKFAVDWGN GHPALAQRMG KEGSGFAREE MSMDYVYDYM LHVLTQYAAL LRYKPTVPEN
501: AVELCPESMA CSAQGRDREF MMESREMYVA GYEPCTLPPP FTAEEEREMA AREEDVRRRV VKMEGR
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.