Factsheet for GSMUA_Achr4P05440_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P03930_001	Banana	cytosol	55.96	65.95
GSMUA_Achr2P03920_001	Banana	mitochondrion	55.96	65.24
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	76.38	63.19
GSMUA_Achr5P12260_001	Banana	mitochondrion	53.9	61.84
GSMUA_Achr1P06820_001	Banana	mitochondrion	44.27	60.12
TraesCS7D01G325300.1	Wheat	cytosol	41.51	57.46
HORVU2Hr1G091800.9	Barley	cytosol	35.09	52.04
TraesCS2A01G369000.1	Wheat	golgi	52.52	49.67
TraesCS2D01G365700.1	Wheat	golgi	51.83	48.71
GSMUA_Achr7P06580_001	Banana	cytosol	32.8	45.69
Zm00001d045318_P001	Maize	cytosol	13.3	45.31
GSMUA_Achr1P06810_001	Banana	mitochondrion	55.5	43.92
KXG26784	Sorghum	mitochondrion	50.46	43.39
Os04t0534000-01	Rice	mitochondrion	50.23	43.11
Zm00001d025933_P001	Maize	mitochondrion, plastid	49.31	42.32
GSMUA_Achr2P03940_001	Banana	mitochondrion	56.19	40.77
TraesCS7A01G328500.1	Wheat	cytosol	52.52	40.46
HORVU0Hr1G021480.1	Barley	cytosol, golgi, nucleus	51.38	39.65
TraesCS7B01G229100.2	Wheat	cytosol, endoplasmic reticulum, plastid	52.29	39.18
EER87863	Sorghum	cytosol, peroxisome, vacuole	49.54	39.13
EES13178	Sorghum	nucleus	52.52	38.55
TraesCS7D01G410200.1	Wheat	cytosol, extracellular, golgi	46.79	37.92
Zm00001d052744_P001	Maize	cytosol	51.83	37.73
TraesCS7D01G325000.2	Wheat	cytosol	47.48	37.5
TraesCS7B01G317100.1	Wheat	endoplasmic reticulum	46.56	37.45
Os08t0101800-01	Rice	cytosol	47.48	35.75
TraesCS7A01G328300.1	Wheat	endoplasmic reticulum	35.09	35.66
Os06t0152700-01	Rice	cytosol, endoplasmic reticulum, plastid	44.5	35.47

Protein Annotations

EnsemblPlants:GSMUA_Achr4P05440_001	EnsemblPlants:GSMUA_Achr4T05440_001	EnsemblPlantsGene:GSMUA_Achr4G05440_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	PFAM:PF05686	SEG:seg
SMART:SM00672	TMHMM:TMhelix	UniParc:UPI000296AA28	UniProt:M0SLB1	MapMan:35.2	:

Description

Putative CAP10 family protein CPIJ013394 [Source:GMGC_GENE;Acc:GSMUA_Achr4G05440_001]

Coordinates

chr4:+:4199809..4202496

Molecular Weight (calculated)

51276.8 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.565

Length

436 amino acids

Sequence
(BLAST)

001: MYSESPERDG SLWIHVVGSP ILYIVGTSQL LIVFNFSSSK KFPRHRDEDL RPWNSTGITR KMLESARQFA AFRLLVIGGR VYVDQYHRVF QTRDLFTLWG
101: FVQLANRYPG RLPDLDLMFN CEDMPTVKAD DYNTSHPPPP LFRYCKDDST VDIVFPDWSF WGWPEINVKP WEVLREEMKE ANDRMAWEKR KPYAFWKGNP
201: TVSGHRKDLM RCNSSNGHDW NARVYAQDWV KEIENGFKDS NLAEQCIYRY KIFVEGRAWS VSSKYILACD SPALFVTTHF HDFMTRGLMP GRHYWPIRED
301: NQCRSIKFAV DWGNKHQEKV QAMGKEGSSF ILEEVKMEFV YQYMLHLLTE YAKLLRYEPT LPENATELCL ESVACGEEGR VREFLMEAMV KWTCDSEPCT
401: LPPPYSAGEL EQLRSRKADA IKQVEEWKQE AWEEEH

Best Arabidopsis Sequence Match ( AT3G48980.1 )
(BLAST)

001: MMRNSPSYTS ATHSRNFDTI LSPLVKTGTG ASNRSYAFFS IFLFLLLGAF LSTRLLLDPS VLIEKEAVSV TERETTQSPE YPQSTKLITE KPKEFTLNCA
101: AFSGNDTGTC PKDNYPTSFR SSAGEGESDR SPSATCPDYF RWIHEDLRPW EKTGITREAL ERANATAIFR LAIINGRIYV EKFREAFQTR DVFTIWGFVQ
201: LLRRYPGKIP DLELMFDCVD WPVVKAAEFA GVDQPPPPPL FRYCANDETL DIVFPDWSYW GWAEVNIKPW ESLLKELREG NQRTKWIDRE PYAYWKGNPT
301: VAETRLDLMK CNLSEVYDWK ARLYKQDWVK ESKEGYKQSD LASQCHHRYK IYIEGSAWSV SEKYILACDS VTLMVKPHYY DFFTRGMFPG HHYWPVKEDD
401: KCRSIKFAVD WGNLHMRKAQ DIGKKASEFV QQELKMDYVY DYMFHLLIQY SKLLRFKPEI PQNSTELCSE AMACPRDGNE RKFMMESLVK RPAETGPCAM
501: PPPYDPASFY SVLKRRQSTT SRIEQWESKY WRKQNKTGS

Arabidopsis Description

O-glucosyltransferase rumi-like protein (DUF821) [Source:UniProtKB/TrEMBL;Acc:A0A178VAW3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.