Factsheet for Os04t0534000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G369000.1	Wheat	golgi	70.28	77.44
TraesCS2D01G365700.1	Wheat	golgi	70.67	77.37
KXG26784	Sorghum	mitochondrion	72.24	72.39
Zm00001d025933_P001	Maize	mitochondrion, plastid	70.47	70.47
HORVU2Hr1G091800.9	Barley	cytosol	40.35	69.73
GSMUA_Achr2P03920_001	Banana	mitochondrion	41.93	56.95
GSMUA_Achr2P03930_001	Banana	cytosol	38.39	52.7
Os02t0642700-01	Rice	plastid	48.03	51.48
GSMUA_Achr1P06820_001	Banana	mitochondrion	32.48	51.4
GSMUA_Achr4P05440_001	Banana	nucleus	43.11	50.23
Os04t0534100-01	Rice	mitochondrion	40.16	46.58
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	47.05	45.35
Os05t0149500-01	Rice	extracellular	26.18	44.93
Os06t0152700-01	Rice	cytosol, endoplasmic reticulum, plastid	44.49	41.32
GSMUA_Achr1P06810_001	Banana	mitochondrion	42.13	38.84
Os08t0101800-01	Rice	cytosol	44.09	38.69
GSMUA_Achr2P03940_001	Banana	mitochondrion	43.9	37.1

Protein Annotations

MapMan:35.2	EntrezGene:4336505	EMBL:AK066666	ProteinID:BAF15326.1	ProteinID:BAS90240.1	ProteinID:CAE04582.2
ncoils:Coil	ProteinID:EAZ31452.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527	InterPro:LipoPS_modifying	EnsemblPlantsGene:Os04g0534000
EnsemblPlants:Os04t0534000-01	PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF30	UniProt:Q7XMJ7	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI00001B1A9A	RefSeq:XP_015633451.1	SEG:seg	:	:

Description

Protein of unknown function DUF821, CAP10-like family protein. (Os04t0534000-01)

Coordinates

chr4:+:26689858..26692543

Molecular Weight (calculated)

56883.7 Da

IEP (calculated)

9.150

GRAVY (calculated)

-0.434

Length

508 amino acids

Sequence
(BLAST)

001: MEAAAKVGRL TRSSLQAASC PAVNGGVVVF FAAVVAGALV SASWMSTGAR VTSIPMIATR NMAQHAAASP EPEPTLPRLG NLAPPPRQPP PPAPAPAPDA
101: AAAASPSSSC PAYFRWIHED LRPWRDAGIT REAVDGAARR YGAKFRVTVV AGRLHVARYG RCFQTRDMFT QWGVLQLLRR YQGRVPDLDL MFDCQDLPVV
201: NAGDRRGRTS SSPPPLFGYC GSEPTLDIAF PDWSFWGWPE LNIKPWETLR GEIADGNAAV NWTGRAPYAY WKGNPTVGAD RRNLLRCNAS GKRDWNARIY
301: EQDWRKEVRD GFRESDLAKQ CTHRYKIYIE GRGWSVSEKY ILACDAVALI VRPRYHDFFS RGLMPLQHYW PIPGGGRGMC RSIKFAVDWG NAHADKAQEI
401: AGNATRFIQE DLTMDRVYDY MFHLLTEYAK LLKYKPTVPD RAVEVTVESM TRGRRGLERQ FMVDTMVEAG SGTGEPCELP PPFSSEELET LRRRQADAVR
501: QVETWEKR

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.