CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025933_P001	Maize	mitochondrion, plastid	86.98	86.81
Os04t0534000-01	Rice	mitochondrion	72.39	72.24
TraesCS2D01G365700.1	Wheat	golgi	65.88	71.98
TraesCS2A01G369000.1	Wheat	golgi	65.29	71.8
HORVU2Hr1G091800.9	Barley	cytosol	39.05	67.35
GSMUA_Achr2P03920_001	Banana	mitochondrion	40.83	55.35
GSMUA_Achr2P03930_001	Banana	cytosol	38.26	52.43
GSMUA_Achr4P05440_001	Banana	nucleus	43.39	50.46
GSMUA_Achr1P06820_001	Banana	mitochondrion	31.16	49.22
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	46.75	44.97
EES07545	Sorghum	plastid	48.72	44.75
EES11181	Sorghum	plastid	48.52	44.32
EES17717	Sorghum	mitochondrion	39.65	40.44
EER87863	Sorghum	cytosol, peroxisome, vacuole	43.98	40.4
GSMUA_Achr1P06810_001	Banana	mitochondrion	41.22	37.93
EES13178	Sorghum	nucleus	44.38	37.88
GSMUA_Achr2P03940_001	Banana	mitochondrion	41.42	34.94

Protein Annotations

EnsemblPlants:KXG26784	EnsemblPlantsGene:SORBI_3006G159800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:LipoPS_modifying
ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF30	PFAM:PF05686	ProteinID:KXG26784	ProteinID:KXG26784.1
SEG:seg	SMART:SM00672	TMHMM:TMhelix	unigene:Sbi.9013	UniParc:UPI00081AD61D	UniProt:A0A1B6PM87
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51802254..51806145

Molecular Weight (calculated)

56776.6 Da

IEP (calculated)

8.925

GRAVY (calculated)

-0.332

Length

507 amino acids

Sequence
(BLAST)

001: MEAAAAPKAS SRLARSLAAA APCYSGVFVF FAALVAGALV SACWMSVSAR LQVTPITPVA TPGIAHNAAT GPEPAPGPPR FPAIVGASTN QTPSAAASFA
101: PPAPAPAEAD APPPDCPSYF RWIHEDLRPW RAAGVTRGAL EGARRLFAPK FRVTVVAGRL YVARYGRCFQ TRAAFTQWGI LQLLRRYPGR VPDLDLMFDC
201: DDLPVVGAGD RHQAPPPLFR YCGSETTLDI AFPDWSFWGW PELNIKPWEA LRREINEENA MVNWMDRAPY AYWKGNPKVG AERLLLLRCN ASGERDWNAR
301: VYAQDWGKEV RHGFRGSDLS KQCTHRYKIY IEGRGWSVSE KYILACDSVA LMVRPRFHDF FSRGLSPLRH YWPVRGDRGM CRSIKYAVDW GNAHTDRAQE
401: MAGNASRFIQ EELTMDRVYD YMFHLLTEYA RLLRYRPEVP RGAAEVTVES MTRGKRGLER QFMADTAVAA ANGEGPCRLQ PAYSAEELEA LRRAREDVVR
501: QVEAWEK

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.