Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G369000.1 | Wheat | golgi | 95.91 | 96.53 |
| HORVU2Hr1G091800.9 | Barley | cytosol | 51.51 | 81.29 |
| Os04t0534000-01 | Rice | mitochondrion | 77.37 | 70.67 |
| KXG26784 | Sorghum | mitochondrion | 71.98 | 65.88 |
| Zm00001d025933_P001 | Maize | mitochondrion, plastid | 70.26 | 64.17 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 45.26 | 56.15 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 42.67 | 53.51 |
| TraesCS7D01G325300.1 | Wheat | cytosol | 35.56 | 52.38 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 48.71 | 51.83 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 34.91 | 50.47 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 51.51 | 45.35 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 46.34 | 44.89 |
| TraesCS2D01G365600.1 | Wheat | plastid | 51.51 | 43.06 |
| TraesCS7D01G410200.1 | Wheat | cytosol, extracellular, golgi | 47.63 | 41.08 |
| TraesCS7D01G325000.2 | Wheat | cytosol | 48.71 | 40.94 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 46.12 | 38.84 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.01 | 37.24 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 47.84 | 36.94 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G365700.1 | EnsemblPlantsGene:TraesCS2D01G365700 | InterPro:LipoPS_modifying | ncoils:Coil | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF30 |
| PFAM:PF05686 | PFscan:PS51257 | SEG:seg | SMART:SM00672 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr2D:-:470396513..470398709
Molecular Weight (calculated)
53014.2 Da
IEP (calculated)
9.483
GRAVY (calculated)
-0.383
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPPAKAGRL TRSLAVNGGV FIFIAAIVAC AFVSAYWMSA SARVASIIPA GWGALPPQQP PAPAPDAAEP ATTACPAYFR WIHEDLRPWR ATGITRETLE
101: GARRYGAKFR VTVLAGRLYV ARYGRCFQTR DVFTQWGILQ LLRRYAGRLP DLDLMFDCQD LPVVNAGDHT PPPLFRYCGS EFTLDIAFPD WSFWGWPELN
201: IKPWEALRRE ISEANAALDW TRRTPYAYWK GNPTVGAARR ELLKCNVSRE RDWNARIYVQ DWRTEVRDGF RASDLAKQCT HRYKMYVEGR GWSVSEKYIL
301: ACDSVTLVVR PRFHDFFSRG LVPLRHYWPV RGDRGQCRSI KFAVDWGNSH PGKAREIGGN ASRFVQEELT MDNVYDYMFH LLSEYARLLR YRPTVPDGAV
401: EVTVRSMARG RRGLEREFMA GTAVNVSGSA EPCELPLPFG SEELETLRRR KADAARRVET WEER
101: GARRYGAKFR VTVLAGRLYV ARYGRCFQTR DVFTQWGILQ LLRRYAGRLP DLDLMFDCQD LPVVNAGDHT PPPLFRYCGS EFTLDIAFPD WSFWGWPELN
201: IKPWEALRRE ISEANAALDW TRRTPYAYWK GNPTVGAARR ELLKCNVSRE RDWNARIYVQ DWRTEVRDGF RASDLAKQCT HRYKMYVEGR GWSVSEKYIL
301: ACDSVTLVVR PRFHDFFSRG LVPLRHYWPV RGDRGQCRSI KFAVDWGNSH PGKAREIGGN ASRFVQEELT MDNVYDYMFH LLSEYARLLR YRPTVPDGAV
401: EVTVRSMARG RRGLEREFMA GTAVNVSGSA EPCELPLPFG SEELETLRRR KADAARRVET WEER
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.