Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, golgi
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 2
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G317100.1 | Wheat | endoplasmic reticulum | 93.12 | 92.44 |
| TraesCS7D01G325300.1 | Wheat | cytosol | 44.05 | 75.24 |
| TraesCS7D01G325000.2 | Wheat | cytosol | 74.35 | 72.46 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 37.17 | 54.05 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 36.99 | 53.21 |
| EES13178 | Sorghum | nucleus | 57.62 | 52.19 |
| Os08t0101800-01 | Rice | cytosol | 54.83 | 50.95 |
| Zm00001d052744_P001 | Maize | cytosol | 55.02 | 49.42 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 29.37 | 49.22 |
| TraesCS2D01G365700.1 | Wheat | golgi | 41.08 | 47.63 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 37.92 | 46.79 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 42.57 | 43.45 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 35.32 | 39.67 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 39.03 | 38.11 |
| TraesCS2D01G365600.1 | Wheat | plastid | 39.22 | 38.02 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 41.08 | 36.77 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.23 | 34.57 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G410200.1 | EnsemblPlantsGene:TraesCS7D01G410200 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7D:-:529471781..529475548
Molecular Weight (calculated)
61220.8 Da
IEP (calculated)
8.005
GRAVY (calculated)
-0.453
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVPCITSW MKGCSPAADE ERASMVPLPS PAGDEIVDKD LAAMHTKPCW TTTARGRVGV AMAIFVLLAL LLGTKWIQLD AAYYTFSPAG TGFSQHGRGH
101: SSTAPLIPIP LSCSNDTDTS SSTTAPSSSS SKRRYYPGVR PPWCPDYFRH IHTDMEPWRA TGITRDAVER AQPHAQFRLV VVGGRAYVEK YRESFQTRDV
201: FTQWGILQLL ARYPGRVPDV DIMFSTLDSP RVLAADYPSP SAAPPLFRYC KEESRELAVL FPDWSFWGWP EVNVRPWAPL MEELVRENAR LPWPEREPYA
301: FWKGNRDVSE VRQDLFRCNN DSAAGKEWNA RLFKQDWDAA GRNGFRDSDV AKQCRHRYKI YVQGHTWSVS EKYILACDSP MLAIDTPFRD FFSRGLVAGK
401: HYWPIDPANK CRAVKFAVDW GNAHPAQARR MGGEGSGFTR EEMGMDYVYE YMLSVLTRYS ALLRYKPAVP EKAVEVSLES MACPRRGRER EFMMESREKY
501: VAVDEPCTMP PPFTVDEVRE MAVRDEQVRS KLLQMVPR
101: SSTAPLIPIP LSCSNDTDTS SSTTAPSSSS SKRRYYPGVR PPWCPDYFRH IHTDMEPWRA TGITRDAVER AQPHAQFRLV VVGGRAYVEK YRESFQTRDV
201: FTQWGILQLL ARYPGRVPDV DIMFSTLDSP RVLAADYPSP SAAPPLFRYC KEESRELAVL FPDWSFWGWP EVNVRPWAPL MEELVRENAR LPWPEREPYA
301: FWKGNRDVSE VRQDLFRCNN DSAAGKEWNA RLFKQDWDAA GRNGFRDSDV AKQCRHRYKI YVQGHTWSVS EKYILACDSP MLAIDTPFRD FFSRGLVAGK
401: HYWPIDPANK CRAVKFAVDW GNAHPAQARR MGGEGSGFTR EEMGMDYVYE YMLSVLTRYS ALLRYKPAVP EKAVEVSLES MACPRRGRER EFMMESREKY
501: VAVDEPCTMP PPFTVDEVRE MAVRDEQVRS KLLQMVPR
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.