Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13178 | Sorghum | nucleus | 78.13 | 78.79 |
| TraesCS7D01G325300.1 | Wheat | cytosol | 35.73 | 67.94 |
| TraesCS7A01G328500.1 | Wheat | cytosol | 57.6 | 60.95 |
| HORVU0Hr1G021480.1 | Barley | cytosol, golgi, nucleus | 56.93 | 60.35 |
| TraesCS7B01G229100.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 57.43 | 59.11 |
| TraesCS7D01G325000.2 | Wheat | cytosol | 54.26 | 58.88 |
| TraesCS7A01G328300.1 | Wheat | endoplasmic reticulum | 42.07 | 58.74 |
| Zm00001d045318_P001 | Maize | cytosol | 12.52 | 58.59 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 34.22 | 55.41 |
| TraesCS7B01G317100.1 | Wheat | endoplasmic reticulum | 50.08 | 55.35 |
| TraesCS7D01G410200.1 | Wheat | cytosol, extracellular, golgi | 49.42 | 55.02 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 33.89 | 54.28 |
| Os08t0101800-01 | Rice | cytosol | 51.75 | 53.54 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 37.73 | 51.83 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 25.88 | 48.29 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 42.24 | 48.01 |
| Zm00001d025933_P001 | Maize | mitochondrion, plastid | 36.23 | 42.72 |
| Zm00001d002836_P006 | Maize | plastid | 37.73 | 41.77 |
| Zm00001d051287_P001 | Maize | plastid | 37.73 | 41.02 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 36.56 | 39.75 |
| Zm00001d024854_P001 | Maize | mitochondrion | 30.72 | 38.33 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 37.06 | 36.94 |
Protein Annotations
| EnsemblPlants:Zm00001d052744_P001 | EnsemblPlants:Zm00001d052744_T001 | EnsemblPlantsGene:Zm00001d052744 | EntrezGene:100283078 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 | ProteinID:AQK57939.1 |
| SEG:seg | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI00022182E4 | UniProt:K7V2W8 | MapMan:35.2 |
Description
Lipopolysaccharide-modifying protein
Coordinates
chr4:-:199500941..199503963
Molecular Weight (calculated)
68115.4 Da
IEP (calculated)
8.171
GRAVY (calculated)
-0.620
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLQEERAA LVPSPWPQQQ RKDGGEHDPE QLMDEDDGDD EEDLQDEQHT RTIRTSTKTA EASSSAERRV PAWWRLRRAQ KLLVPTRGVG LVIAGLLVLV
101: LLLVVGGGGG ANTSRRRWIH LDYASSFLRG GGLRQHQWPP HHVPSPAADL VPIPFSCGGN GSACPRRQTA TSPPSPSPSS SSPPAGTKSS SSKNKQPPPQ
201: CPDYFRFIHS DLSPWRETGI TREAVERGRH RAAFRLVVVD GRAYVETYHR VFQTRDTFTQ WGIAQLLARY PGRVPDLDLM FNCEDMPEVK VKPSEESSAP
301: PLFRYCKDDS TVDIVFPDWS FWGWPEVNIR PWAPLLEEMA AEMGRLPWAD REPYAYWKGN PTVSAERADL RRCNDSSSSG GTRVFWQDWG AAIRDGFRDS
401: NLAKQCRYRY KIYVRGRSWS VSLKYILACD SPVLLIATPF KDFFSRGLVA GRHYWPIDPG ARKCADINFA VHDWGNAHPE QARRMAEEGS GFARHQLSMD
501: YVYDYMLHLL TQYAGLLRYK PTVPENAVEL CAETVACPAA HHSNRREFDF MMQSRERYIA DYQPCTLPPP FTDRHIREMT RRDQEVRANV HKMMTTVTP
101: LLLVVGGGGG ANTSRRRWIH LDYASSFLRG GGLRQHQWPP HHVPSPAADL VPIPFSCGGN GSACPRRQTA TSPPSPSPSS SSPPAGTKSS SSKNKQPPPQ
201: CPDYFRFIHS DLSPWRETGI TREAVERGRH RAAFRLVVVD GRAYVETYHR VFQTRDTFTQ WGIAQLLARY PGRVPDLDLM FNCEDMPEVK VKPSEESSAP
301: PLFRYCKDDS TVDIVFPDWS FWGWPEVNIR PWAPLLEEMA AEMGRLPWAD REPYAYWKGN PTVSAERADL RRCNDSSSSG GTRVFWQDWG AAIRDGFRDS
401: NLAKQCRYRY KIYVRGRSWS VSLKYILACD SPVLLIATPF KDFFSRGLVA GRHYWPIDPG ARKCADINFA VHDWGNAHPE QARRMAEEGS GFARHQLSMD
501: YVYDYMLHLL TQYAGLLRYK PTVPENAVEL CAETVACPAA HHSNRREFDF MMQSRERYIA DYQPCTLPPP FTDRHIREMT RRDQEVRANV HKMMTTVTP
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.