Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G325300.1 | Wheat | cytosol | 52.92 | 97.78 |
| TraesCS7A01G328500.1 | Wheat | cytosol | 91.41 | 93.99 |
| HORVU0Hr1G021480.1 | Barley | cytosol, golgi, nucleus | 85.91 | 88.5 |
| TraesCS7B01G317100.1 | Wheat | endoplasmic reticulum | 59.11 | 63.47 |
| EES13178 | Sorghum | nucleus | 61.0 | 59.76 |
| Zm00001d052744_P001 | Maize | cytosol | 59.11 | 57.43 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 36.43 | 57.3 |
| Os08t0101800-01 | Rice | cytosol | 56.01 | 56.3 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 35.4 | 55.08 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 28.87 | 52.34 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 39.18 | 52.29 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 44.16 | 48.77 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 37.8 | 43.82 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 38.83 | 41.02 |
| TraesCS2B01G386200.1 | Wheat | plastid | 38.32 | 40.33 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 40.03 | 38.77 |
| TraesCS1B01G117800.1 | Wheat | mitochondrion | 32.13 | 38.56 |
| TraesCS6B01G266000.1 | Wheat | plastid | 40.03 | 38.13 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G229100.2 | EnsemblPlantsGene:TraesCS7B01G229100 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7B:-:429266894..429276420
Molecular Weight (calculated)
65376.4 Da
IEP (calculated)
8.006
GRAVY (calculated)
-0.589
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRHTEKKRE AESQLATPLA QGQRKLDRPP MKSFLVSSGD EEEGAALVPP QEDGGKAADP AVERLSPSSP STTKPWWKTS LLSPTKGAVG LVIGGLVLLA
101: LLAGAKWIDL DASFLRGNGT GTGSTSRRWR HPPRRQRSSP PVPIPFSCGN GTSSSSTPLC RHPRGGMPPP AASPSPAAPE RPVPPPPSCP DYFRHIHSDL
201: APWREKGISR EAVERGQPNA AFRLTVVSGR AYVETYHRVF QTRDLFTEWG IAQLLARYPG RVPDLDLMFN CEDMPELRAA DYPDTSAAPP LFRYCKDGTS
301: LEVLFPDWSF WGWPEVNIRP WGPLMKEIAK ENARLPWPDR EPYAFWKGNP DVSDARRDLF RCSNDSAAGK DWNARLFALD WGAANRNGFK GSNLAEQCRY
401: RYKIYVQGRS WSVSEKYILA CDSPMLAIDT PFEDFFSRGL VAGRHYWPID PRDKCRAVKF AVDWGNAHPA LAQRMGKEGS GFAREEMSMD YVYDYMLHVL
501: TQYAALLRYK PTVPENAVEL CPESMACSAQ GRDREFMMES REMYVAGYEP CTLPPPFTAE EEREMAAREE DVRRKVVKME GR
101: LLAGAKWIDL DASFLRGNGT GTGSTSRRWR HPPRRQRSSP PVPIPFSCGN GTSSSSTPLC RHPRGGMPPP AASPSPAAPE RPVPPPPSCP DYFRHIHSDL
201: APWREKGISR EAVERGQPNA AFRLTVVSGR AYVETYHRVF QTRDLFTEWG IAQLLARYPG RVPDLDLMFN CEDMPELRAA DYPDTSAAPP LFRYCKDGTS
301: LEVLFPDWSF WGWPEVNIRP WGPLMKEIAK ENARLPWPDR EPYAFWKGNP DVSDARRDLF RCSNDSAAGK DWNARLFALD WGAANRNGFK GSNLAEQCRY
401: RYKIYVQGRS WSVSEKYILA CDSPMLAIDT PFEDFFSRGL VAGRHYWPID PRDKCRAVKF AVDWGNAHPA LAQRMGKEGS GFAREEMSMD YVYDYMLHVL
501: TQYAALLRYK PTVPENAVEL CPESMACSAQ GRDREFMMES REMYVAGYEP CTLPPPFTAE EEREMAAREE DVRRKVVKME GR
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.