Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G325300.1 | Wheat | cytosol | 52.39 | 93.97 |
| TraesCS7A01G328500.1 | Wheat | cytosol | 88.85 | 88.69 |
| TraesCS7B01G229100.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 88.5 | 85.91 |
| EES13178 | Sorghum | nucleus | 61.95 | 58.92 |
| Zm00001d052744_P001 | Maize | cytosol | 60.35 | 56.93 |
| Os08t0101800-01 | Rice | cytosol | 57.52 | 56.13 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 36.64 | 55.95 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 36.28 | 54.81 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 29.38 | 51.71 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 39.65 | 51.38 |
| HORVU2Hr1G091800.9 | Barley | cytosol | 25.49 | 48.98 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 44.78 | 48.01 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 40.0 | 45.47 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 39.65 | 40.65 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 40.35 | 37.94 |
| HORVU1Hr1G020420.2 | Barley | mitochondrion, plastid | 33.45 | 36.84 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G021480.1 | EnsemblPlantsGene:HORVU0Hr1G021480 | GO:GO:0005575 | GO:GO:0016020 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 |
| PANTHER:PTHR12203:SF31 | PFAM:PF05686 | SEG:seg | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI000296038F |
| UniProt:M0WL13 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:112474737..112481897
Molecular Weight (calculated)
63076.8 Da
IEP (calculated)
7.605
GRAVY (calculated)
-0.529
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGCGGLIHA GDEEEGAALV PLPAADELQE APHKVVDDDG DAAERTVERQ PPSSSATTTT RPCWKTPLLS PTKGAVGLVI GGLVLLALLA GAGWVDLDAS
101: FLRGNGSGTG GTGRRWRHPP RRQRSSPPVP IPFSCGNGTS SSSTPLCRRP RVGMPPPAAS PSPAAPPPPS CPDYFRHIHS DLEPWREKGM SREAVERGRP
201: KAAFRLTVVS GRAYVETYHR VFQTRDLFTQ WGIAQLLARY PGRVPDLDLM FNCEDMPELR AADYPDTSAA PPLFRYCKDG TSLEVLFPDW SFWGWPEVNI
301: RPWGPLMKEI AEENARLPWP DRQPYAFWKG NPDVSRARRD LFRCSNDSAA GRDWNARLFA LDWGAASRNG FKGSTNLAEQ CRYRYKIYVQ GRSWSVSEKY
401: ILACDSPMLA IDTPFDDFFS RGLVAGRHYW PVDPGDKCRA VKFAVDWGNA HPALAQRMGK EGSGFAREDM SMDYVYDYML HVLTHYAALL RYKPTVPDKA
501: VELCPESMAC SAQGRDREFM MESREMYEAG YEPCTMPPPF TAEEAREMAA REKDVRRKVV KMEGR
101: FLRGNGSGTG GTGRRWRHPP RRQRSSPPVP IPFSCGNGTS SSSTPLCRRP RVGMPPPAAS PSPAAPPPPS CPDYFRHIHS DLEPWREKGM SREAVERGRP
201: KAAFRLTVVS GRAYVETYHR VFQTRDLFTQ WGIAQLLARY PGRVPDLDLM FNCEDMPELR AADYPDTSAA PPLFRYCKDG TSLEVLFPDW SFWGWPEVNI
301: RPWGPLMKEI AEENARLPWP DRQPYAFWKG NPDVSRARRD LFRCSNDSAA GRDWNARLFA LDWGAASRNG FKGSTNLAEQ CRYRYKIYVQ GRSWSVSEKY
401: ILACDSPMLA IDTPFDDFFS RGLVAGRHYW PVDPGDKCRA VKFAVDWGNA HPALAQRMGK EGSGFAREDM SMDYVYDYML HVLTHYAALL RYKPTVPDKA
501: VELCPESMAC SAQGRDREFM MESREMYEAG YEPCTMPPPF TAEEAREMAA REKDVRRKVV KMEGR
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.