Factsheet for HORVU6Hr1G060750.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome

Predictor Summary:

plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0642700-01	Rice	plastid	79.48	83.33
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	71.63	75.91
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	72.84	75.57
TraesCS6B01G266000.1	Wheat	plastid	91.95	74.8
EES07545	Sorghum	plastid	80.48	72.46
Zm00001d051287_P001	Maize	plastid	80.08	72.23
GSMUA_Achr5P12260_001	Banana	mitochondrion	51.31	67.11
VIT_16s0050g00190.t01	Wine grape	nucleus	36.62	65.0
VIT_02s0025g03710.t01	Wine grape	cytosol	34.21	62.5
PGSC0003DMT400000701	Potato	mitochondrion	9.26	59.74
KRH65106	Soybean	cytosol	20.72	59.54
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	58.35	58.12
VIT_15s0046g03110.t01	Wine grape	cytosol	43.26	57.18
KRH08971	Soybean	cytosol	27.16	56.49
VIT_15s0046g03080.t01	Wine grape	cytosol	47.28	55.56
VIT_15s0046g03050.t01	Wine grape	cytosol	47.08	55.32
VIT_15s0046g03120.t01	Wine grape	cytosol	47.48	54.76
KRH08981	Soybean	plastid	41.65	54.47
VIT_15s0046g03140.t01	Wine grape	cytosol	25.35	54.08
KRH09038	Soybean	cytosol	29.38	54.07
VIT_15s0046g03100.t01	Wine grape	mitochondrion	13.88	53.91
CDY69828	Canola	mitochondrion	41.25	53.39
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	55.13	53.31
HORVU2Hr1G091800.9	Barley	cytosol	31.19	52.72
Solyc03g025780.2.1	Tomato	golgi	53.72	52.66
KRH08960	Soybean	plastid	21.93	52.15
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	53.72	51.95
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	51.91	51.81
KRH65107	Soybean	cytosol	15.9	51.63
KRH09051	Soybean	cytosol, nucleus, plasma membrane	27.77	51.11
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	55.13	50.55
VIT_15s0046g03150.t01	Wine grape	golgi	52.31	50.1
KRH09011	Soybean	cytosol	53.72	50.0
Bra009709.1-P	Field mustard	plastid	53.72	50.0
CDX88050	Canola	plastid	53.52	49.81
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	52.52	49.71
CDX80388	Canola	plastid	53.32	49.53
CDX71752	Canola	cytosol	42.66	49.3
Bra007591.1-P	Field mustard	cytosol	42.25	48.84
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	46.28	48.73
KRH40487	Soybean	cytosol	34.0	48.7
KRH48182	Soybean	cytosol, golgi, plasma membrane	49.9	48.63
Bra018021.1-P	Field mustard	golgi	52.72	48.52
AT3G48980.2	Thale cress	plastid	52.92	48.26
KRH65090	Soybean	extracellular	45.88	47.9
CDY05887	Canola	golgi	52.72	47.9
CDY08097	Canola	plastid	52.72	47.9
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	50.3	47.89
Bra007592.1-P	Field mustard	cytosol	32.19	47.76
VIT_15s0046g03130.t01	Wine grape	cytosol	21.33	47.75
Bra007590.1-P	Field mustard	cytosol	47.08	47.66
CDY58789	Canola	endoplasmic reticulum, golgi	47.69	47.59
CDY45704	Canola	endoplasmic reticulum, golgi	47.69	47.59
CDY48932	Canola	endoplasmic reticulum	46.88	47.45
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	47.48	47.39
CDX71753	Canola	endoplasmic reticulum	46.68	47.25
AT3G61290.1	Thale cress	cytosol	42.45	46.37
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	45.88	45.78
VIT_15s0046g03070.t01	Wine grape	golgi	48.29	45.71
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	45.88	45.6
KRH38478	Soybean	cytosol	53.32	45.14
KRG88606	Soybean	cytosol	19.52	45.12
KRH48168	Soybean	plasma membrane	45.07	45.07
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	46.48	45.03
CDY37069	Canola	golgi	47.28	44.93
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	47.69	44.89
KRH08953	Soybean	cytosol, extracellular, nucleus	13.08	44.83
AT2G45830.1	Thale cress	mitochondrion	46.88	44.55
KRH00707	Soybean	cytosol	32.6	44.26
CDX89107	Canola	mitochondrion	40.64	44.1
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	45.27	44.03
KRG88612	Soybean	cytosol	24.75	43.93
PGSC0003DMT400055754	Potato	nucleus	13.28	43.42
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	45.67	42.27
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	18.51	41.63
CDY18896	Canola	golgi, plasma membrane, plastid	32.8	41.37
AT2G45840.1	Thale cress	plasma membrane	43.46	41.3
AT1G63420.1	Thale cress	mitochondrion	47.48	40.83
CDY48930	Canola	plasma membrane	43.26	40.57
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	43.26	40.57
CDX71749	Canola	cytosol, golgi, plasma membrane	35.41	40.55
VIT_15s0046g03060.t01	Wine grape	cytosol	9.66	40.34
Solyc05g048800.1.1	Tomato	cytosol	19.72	40.33
CDX71750	Canola	plasma membrane	42.05	40.19
HORVU0Hr1G021480.1	Barley	cytosol, golgi, nucleus	45.47	40.0
Bra027639.1-P	Field mustard	mitochondrion	46.48	39.97
CDY25494	Canola	mitochondrion	46.48	39.9
AT3G61280.1	Thale cress	plasma membrane	42.86	39.74
Bra039310.1-P	Field mustard	golgi, mitochondrion	34.41	39.58
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	39.03	37.82
CDY48931	Canola	plasma membrane	23.74	35.98
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	43.46	33.86
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	43.06	33.54
KRG88496	Soybean	cytosol	11.67	33.14
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	11.67	31.87
PGSC0003DMT400000098	Potato	cytosol	46.28	26.53
CDY42493	Canola	cytosol	39.84	22.89

Protein Annotations

EnsemblPlants:HORVU6Hr1G060750.4	EnsemblPlantsGene:HORVU6Hr1G060750	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF33
PFAM:PF05686	SEG:seg	SMART:SM00672	UniParc:UPI000B469878	UniProt:A0A287UD24	MapMan:35.2

Description

No Description!

Coordinates

chrchr6H:+:404998312..405001032

Molecular Weight (calculated)

56610.8 Da

IEP (calculated)

8.640

GRAVY (calculated)

-0.416

Length

497 amino acids

Sequence
(BLAST)

001: CEIRPAFQTG MLTTVDPISV QAILTGTYTT SIPAIPAGPP PPRPTYSLSC SAPPLARDPD IPSNISQTLS LALASNATCA SLPDPQPIPA AAAANATCPA
101: YFRFIHEDLH PWRAAGGITR AMLDRARATA NFRLVVLRGR AYIERIAPAF QTRDLFTIWG ILQLLRRYPG RVPDLDLMFD CVDWPVVHAD EYQGDNATAM
201: PPLFRYCGDN ETLDVVFPDW SFWGWAEINI KPWDALQKDL SVGNKRVRWI DREPYAYWKG NPEVAAIRQE LVKCNVSSKQ EWNARIYKQD WIKESKAGYK
301: KSNLANQCTH RYKIYIEGSA WSVSEKYILA CDSMTLVIKP KYYDFFSRVL MPTQHYWPVR DDSKCSSIKY AVDWGNSHKK KAQQIGKKAS KFIQQELSMD
401: HIYDYMFHLL TEYAKLLRFK PTKPPEAVEV CPESLACQAI GREKKFMQDS MVKSANVAGP CNLPPPFSPE EYRKLQQRKE KYMDQVETLE RNASKLE

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [plastid,endoplasmic reticulum,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.