CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, plasma membrane

Predictor Summary:

plastid 3
mitochondrion 3
plasma membrane 1
nucleus 2
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g03710.t01	Wine grape	cytosol	35.63	68.38
KRH65106	Soybean	cytosol	22.03	66.47
GSMUA_Achr5P12260_001	Banana	mitochondrion	45.4	62.37
KRH08971	Soybean	cytosol	27.39	59.83
KRH09038	Soybean	cytosol	29.69	57.41
PGSC0003DMT400000701	Potato	mitochondrion	8.43	57.14
KRH48182	Soybean	cytosol, golgi, plasma membrane	52.68	53.92
KRH65107	Soybean	cytosol	15.71	53.59
KRH09051	Soybean	cytosol, nucleus, plasma membrane	27.59	53.33
Os02t0642700-01	Rice	plastid	47.7	52.53
KRH08981	Soybean	plastid	38.12	52.37
KRH65090	Soybean	extracellular	46.55	51.05
KRH09011	Soybean	cytosol	51.53	50.37
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.89	50.3
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	50.57	50.29
KRH40487	Soybean	cytosol	33.14	49.86
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	20.88	49.32
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	44.06	49.04
Bra027639.1-P	Field mustard	mitochondrion	54.21	48.96
KRG88606	Soybean	cytosol	20.11	48.84
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	46.93	48.8
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	46.74	48.8
KRH48168	Soybean	plasma membrane	46.36	48.69
CDY25494	Canola	mitochondrion	53.83	48.53
KRH08953	Soybean	cytosol, extracellular, nucleus	13.41	48.28
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	44.25	48.23
AT1G63420.1	Thale cress	mitochondrion	53.26	48.1
KRG88612	Soybean	cytosol	25.29	47.14
KRH08960	Soybean	plastid	18.77	46.89
KRH00707	Soybean	cytosol	32.57	46.45
Zm00001d051287_P001	Maize	plastid	48.47	45.92
Zm00001d002836_P006	Maize	plastid	47.32	45.66
KRH38478	Soybean	cytosol	51.34	45.66
EES11181	Sorghum	plastid	48.08	45.23
EES07545	Sorghum	plastid	47.7	45.11
TraesCSU01G025200.1	Wheat	plastid	48.28	44.76
TraesCS2D01G365600.1	Wheat	plastid	47.51	44.68
Os04t0534100-01	Rice	mitochondrion	37.36	44.52
TraesCS2B01G386200.1	Wheat	plastid	47.13	44.48
TraesCS2A01G368900.2	Wheat	plastid	46.93	44.14
TraesCS6B01G266000.1	Wheat	plastid	48.66	41.57
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	36.4	40.95
KRH30306	Soybean	plastid	35.82	37.7
KRG88496	Soybean	cytosol	11.69	34.86
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	11.3	32.42

Protein Annotations

EntrezGene:100793663	MapMan:35.2	EMBL:ACUP02000677	EnsemblPlantsGene:GLYMA_01G218400	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527	UniProt:I1JA60
ProteinID:KRH77520.1	EnsemblPlants:KRH77521	ProteinID:KRH77521	ProteinID:KRH77521.1	InterPro:LipoPS_modifying	PFAM:PF05686
PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI00023375F9	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:54842372..54846615

Molecular Weight (calculated)

61151.2 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.605

Length

522 amino acids

Sequence
(BLAST)

001: MMQRFITERS KKQLTTDSTL VKKAPVSTYT PLLLLLILLT TAFVSSLWST LSTTNTKPTI IGKKTSVANV VSAKDSKSEE KSSSRKRFQL EATLNCSNNG
101: KQRCTSYPTS GVFEREEGGV CPEYFRWIHE DVGAWKERGI SREMVERAKK SAHFRLVVKR GRVYVERYKK SIQTREVFTM WGIVQLLRKY PGKVADLELM
201: FDCDDLPVIR GSSLAGPPPL FRYCGDRWTD DIVFPDWSFW GWAEINIRPW EHVLKEMEKG NRRIKWNDRE PYAYWKGNPF VAETRQDLLK CNVSTTQDWN
301: ARLYVQDWIQ ESQQGFNNSN LASQCTHRYK IYIEGYAWSV SEKYILACDS VTLMVKPRFY DFFIRSLQPM QHYWPIRDKG KCKSIKHAVD WGNNHKEEAQ
401: KIGKAASKFI QEELKMDYVY DYMFHLLNEY AKLLKFEPRV PEGAEELCVE AMACTRSGLE RKFMTESMVR EPSTKAPCSL PPPLEPTSRR VFYANKLNSI
501: RRVERWEDNY WKNSTQQLHT RI

Best Arabidopsis Sequence Match ( AT1G63420.1 )
(BLAST)

001: MTSLFSKPRA LTSHITNFKT YRPVIGKLHV ATLTLLLFLI AAGIAVTSSL WLNKTTKAFD RPTLVATKPE PELEPPHETG VLVNCTSFLN QNRSGSCSRT
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I232]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.