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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • golgi 1
  • nucleus 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d051287_P001 Maize plastid 94.38 94.56
Os02t0642700-01 Rice plastid 71.01 82.7
HORVU6Hr1G060750.4 Barley cytosol, peroxisome 72.46 80.48
TraesCS2B01G093400.1 Wheat golgi, mitochondrion, plastid 69.02 75.9
TraesCSU01G025200.1 Wheat plastid 76.99 75.49
TraesCS6B01G266000.1 Wheat plastid 81.88 73.98
TraesCS6A01G237500.1 Wheat cytosol, mitochondrion 57.43 67.59
TraesCS6D01G220200.2 Wheat cytosol, mitochondrion 57.97 66.81
GSMUA_Achr5P12260_001 Banana mitochondrion 45.47 66.05
EES11181 Sorghum plastid 65.22 64.86
VIT_16s0050g00190.t01 Wine grape nucleus 31.16 61.43
VIT_02s0025g03710.t01 Wine grape cytosol 30.25 61.4
VIT_16s0050g00160.t01 Wine grape endoplasmic reticulum, golgi, vacuole 51.27 56.71
KRH65106 Soybean cytosol 17.75 56.65
PGSC0003DMT400000701 Potato mitochondrion 7.79 55.84
VIT_15s0046g03110.t01 Wine grape cytosol 37.86 55.59
VIT_15s0046g03050.t01 Wine grape cytosol 42.57 55.56
VIT_15s0046g03080.t01 Wine grape cytosol 42.39 55.32
KRH08971 Soybean cytosol 23.91 55.23
VIT_15s0046g03120.t01 Wine grape cytosol 42.93 54.99
VIT_15s0046g03140.t01 Wine grape cytosol 23.01 54.51
Solyc03g025770.2.1 Tomato endoplasmic reticulum, golgi, vacuole 48.91 54.22
VIT_15s0046g03100.t01 Wine grape mitochondrion 12.5 53.91
CDY69828 Canola mitochondrion 37.32 53.65
KRH08981 Soybean plastid 36.78 53.42
KRH09038 Soybean cytosol 26.09 53.33
PGSC0003DMT400037089 Potato endoplasmic reticulum, golgi, vacuole 49.46 53.11
KRH08960 Soybean plastid 20.11 53.11
Solyc03g025760.2.1 Tomato endoplasmic reticulum, golgi 49.09 52.72
Solyc03g025780.2.1 Tomato golgi 48.37 52.66
Bra009709.1-P Field mustard plastid 50.72 52.43
AT5G23850.1 Thale cress endoplasmic reticulum, mitochondrion, peroxisome, plastid 51.09 52.03
CDX88050 Canola plastid 50.18 51.87
CDX80388 Canola plastid 50.18 51.78
KRH09011 Soybean cytosol 49.64 51.31
KRH09010 Soybean cytosol, peroxisome, plasma membrane 48.73 51.24
KRH09051 Soybean cytosol, nucleus, plasma membrane 25.0 51.11
Bra018021.1-P Field mustard golgi 49.82 50.93
VIT_15s0046g03150.t01 Wine grape golgi 47.46 50.48
CDY05887 Canola golgi 50.0 50.46
KRH40487 Soybean cytosol 31.7 50.43
CDY08097 Canola plastid 49.82 50.27
Bra007592.1-P Field mustard cytosol 30.43 50.15
Bra007591.1-P Field mustard cytosol 38.95 50.0
CDX71752 Canola cytosol 38.95 50.0
KRH48182 Soybean cytosol, golgi, plasma membrane 46.2 50.0
Solyc01g094390.2.1 Tomato endoplasmic reticulum, golgi, vacuole 42.39 49.58
AT3G48980.2 Thale cress plastid 48.91 49.54
KRH65090 Soybean extracellular 42.21 48.95
KXG26784 Sorghum mitochondrion 44.75 48.72
Bra007590.1-P Field mustard cytosol 43.12 48.47
CDY45704 Canola endoplasmic reticulum, golgi 43.66 48.39
KRH65107 Soybean cytosol 13.41 48.37
CDY48932 Canola endoplasmic reticulum 42.93 48.27
CDX71753 Canola endoplasmic reticulum 42.75 48.07
VIT_15s0046g03070.t01 Wine grape golgi 45.65 48.0
Bra003444.1-P Field mustard endoplasmic reticulum, golgi 43.3 47.99
CDY58789 Canola endoplasmic reticulum, golgi 43.3 47.99
AT3G61290.1 Thale cress cytosol 39.49 47.91
KRH77521 Soybean endoplasmic reticulum, nucleus, plasma membrane, plastid 45.11 47.7
KRH38478 Soybean cytosol 49.46 46.51
VIT_15s0046g03130.t01 Wine grape cytosol 18.66 46.4
KRH48168 Soybean plasma membrane 41.67 46.28
AT3G61270.1 Thale cress cytosol, golgi, plasma membrane 41.67 46.18
PGSC0003DMT400055754 Potato nucleus 12.68 46.05
KRH00707 Soybean cytosol 30.25 45.63
Solyc01g094380.2.1 Tomato cytosol, extracellular, golgi, plastid 42.39 45.61
KRH65092 Soybean endoplasmic reticulum, plasma membrane, vacuole 41.3 45.6
CDX89107 Canola mitochondrion 37.68 45.41
CDY18897 Canola golgi, mitochondrion, plastid, vacuole 41.85 45.21
AT2G45830.1 Thale cress mitochondrion 42.39 44.74
VIT_15s0046g03090.t01 Wine grape cytoskeleton, golgi, nucleus 43.12 44.32
CDY27355 Canola golgi, mitochondrion, nucleus, plasma membrane, plastid 42.21 44.13
AT2G45840.1 Thale cress plasma membrane 41.67 43.98
VIT_02s0025g03720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 17.57 43.89
CDY37069 Canola golgi 41.49 43.79
Bra007593.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 42.03 43.77
CDY48930 Canola plasma membrane 41.85 43.58
AT3G61280.1 Thale cress plasma membrane 42.21 43.47
CDY18896 Canola golgi, plasma membrane, plastid 30.98 43.4
CDX71750 Canola plasma membrane 40.58 43.08
CDX71749 Canola cytosol, golgi, plasma membrane 33.51 42.63
AT1G63420.1 Thale cress mitochondrion 44.57 42.56
KRG88606 Soybean cytosol 16.49 42.33
CDY25494 Canola mitochondrion 44.38 42.31
Bra027639.1-P Field mustard mitochondrion 44.2 42.21
KRH08953 Soybean cytosol, extracellular, nucleus 11.05 42.07
EER87863 Sorghum cytosol, peroxisome, vacuole 42.03 42.03
KRG88612 Soybean cytosol 21.01 41.43
VIT_15s0046g03060.t01 Wine grape cytosol 8.88 41.18
EES17717 Sorghum mitochondrion 35.69 39.64
Solyc05g048800.1.1 Tomato cytosol 17.21 39.09
Bra039310.1-P Field mustard golgi, mitochondrion 30.43 38.89
CDY48931 Canola plasma membrane 23.01 38.72
EES13178 Sorghum nucleus 41.12 38.22
Bra004942.1-P Field mustard mitochondrion, peroxisome, plasma membrane, plastid 40.58 35.11
CDX74769 Canola mitochondrion, peroxisome, plasma membrane, plastid 40.58 35.11
KRG88496 Soybean cytosol 10.69 33.71
KRH09043 Soybean cytosol, golgi, mitochondrion, plastid 10.33 31.32
PGSC0003DMT400000098 Potato cytosol 43.3 27.57
CDY42493 Canola cytosol 36.78 23.47
Protein Annotations
MapMan:35.2EntrezGene:8075173UniProt:C5XS59ncoils:CoilEnsemblPlants:EES07545ProteinID:EES07545
ProteinID:EES07545.1GO:GO:0000307GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006464GO:GO:0006629GO:GO:0006664
GO:GO:0007049GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0012505
GO:GO:0016020GO:GO:0016021GO:GO:0016538GO:GO:0016740GO:GO:0019538GO:GO:0030234
GO:GO:0045737GO:GO:0045944GO:GO:0046527GO:GO:1901409InterPro:LipoPS_modifyingPFAM:PF05686
PANTHER:PTHR12203PANTHER:PTHR12203:SF33SMART:SM00672EnsemblPlantsGene:SORBI_3004G303000unigene:Sbi.7143TMHMM:TMhelix
UniParc:UPI0001A860D7RefSeq:XP_002454569.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:-:64174309..64179304
Molecular Weight (calculated)
62737.1 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.364
Length
552 amino acids
Sequence
(BLAST)
001: MASAAVAVIP DGRRWSNKGP GSSSSSPVTT AIFLFFFVVV VGVLVSARWI TTTTHLSITN LDQWSSKPAI LTATQTTSIP AIPAAPPPPR PTYSLSCTAP
101: PLPRDPTIPS NISQTLDLVL SPNASSASTC AAVPDPPPLP ANSNASSTCP AYFRFIHEDL HPWRAAGGIT RAMVDRARAT ANFRLVVIRG RAYIERIAPA
201: FQTRDLFTIW GILQLLRRYP GRVPDLDLMF DCVDWPVVHA DQYEGENATV LPPLFRYCGN NETLDVVFPD WSFWGWPEIN IKPWDALQKE LNRGNKRVKW
301: LNREPYAYWK GNPDVAVIRQ ELVKCNVSSE HEWNARIYKQ DWLKEIKAGY KQSNLAGQCT HRYKIYIEGS AWSVSEKYIL ACDSMTLVVT PKYYDFYSRV
401: LMPMQHYWPI WDDNKCSSIK YAVDWGNSHK QKAQRIGKQG SNFIQKELSM EYVYDYMFHL LTEYAKLLRF KPTKPPEAIE VCPESLACQA IGRERKFMKD
501: SMVRSASDAG PCDLPPPFNP EEFKALQRRR EKTMKQIETW MQKASRPVDK KP
Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)
001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS
Arabidopsis Description
At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [plastid,endoplasmic reticulum,peroxisome,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.