Factsheet for Bra007593.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

nucleus 3
endoplasmic reticulum 2
plastid 1
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48930	Canola	plasma membrane	98.68	98.68
Bra007592.1-P	Field mustard	cytosol	55.66	88.06
Bra007591.1-P	Field mustard	cytosol	67.36	83.02
VIT_15s0046g03100.t01	Wine grape	mitochondrion	14.15	58.59
VIT_15s0046g03140.t01	Wine grape	cytosol	24.34	55.36
KRH40487	Soybean	cytosol	34.53	52.74
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.55	52.37
KRH00707	Soybean	cytosol	33.58	48.63
KRH65090	Soybean	extracellular	42.83	47.69
Bra007590.1-P	Field mustard	cytosol	44.15	47.66
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	44.53	47.39
KRH48168	Soybean	plasma membrane	43.4	46.28
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	43.02	45.6
Os02t0642700-01	Rice	plastid	40.75	45.57
VIT_15s0046g03130.t01	Wine grape	cytosol	18.87	45.05
Bra018021.1-P	Field mustard	golgi	45.28	44.44
Bra009709.1-P	Field mustard	plastid	44.53	44.19
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	40.57	43.26
Bra039310.1-P	Field mustard	golgi, mitochondrion	34.53	42.36
EES07545	Sorghum	plastid	43.77	42.03
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	39.43	41.63
Zm00001d051287_P001	Maize	plastid	43.21	41.56
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	49.81	41.38
Zm00001d002836_P006	Maize	plastid	41.7	40.85
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.79	40.71
Os04t0534100-01	Rice	mitochondrion	33.58	40.64
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	35.85	40.51
EES11181	Sorghum	plastid	41.13	39.28
Bra027639.1-P	Field mustard	mitochondrion	42.26	38.75
TraesCSU01G025200.1	Wheat	plastid	40.94	38.54
TraesCS2B01G386200.1	Wheat	plastid	40.19	38.52
TraesCS2D01G365600.1	Wheat	plastid	40.0	38.2
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	36.23	38.02
TraesCS2A01G368900.2	Wheat	plastid	39.81	38.02
Bra015563.1-P	Field mustard	mitochondrion	36.04	37.9
TraesCS6B01G266000.1	Wheat	plastid	42.08	36.5

Protein Annotations

EnsemblPlants:Bra007593.1	EnsemblPlants:Bra007593.1-P	EnsemblPlantsGene:Bra007593	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SEG:seg
SMART:SM00672	TMHMM:TMhelix	UniParc:UPI000254294E	UniProt:M4CTP9	MapMan:35.2	:

Description

AT3G61280 (E=2e-257) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61290.1); Has 467 Blast hits to 463 proteins in 98 species: Archae - 0; Bacteria - 38; Metazoa - 201; Fungi - 82; Plants - 115; Viruses - 4; Other Eukaryotes - 27 (source: NCBI BLink).

Coordinates

chrA09:+:29930797..29939106

Molecular Weight (calculated)

62546.2 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.528

Length

530 amino acids

Sequence
(BLAST)

001: MRENIHVAQA TEHHHHQQQH KIATNLSSKL AKTRVTAKIH IFVFFIFLLS ASLSWIFFTF VLGESRFQVI SVFTRNTNKS ATTITTIPKT IPLNCTLLNN
101: ATTQTCPSNY PTKFEPTISS SETCPDYFRW IQQDLKVWQE TGITRETLER AKPNAHFRVV IKSGRLYVDQ YVKSYQTRDV FTIWGILQLL RTYPGQIPDL
201: ELLFLCYDKP VIWKRDFNKT REDTWPPPPL FRYCGHRDAY DIVFPDWSFW GWPEVNIKEW KKLSVALQEG NKRVKWKDRI PYAYWKGNPH VSTPIRKELM
301: RCNFSDKYDP MLRLYAQDWR NETKKGFKGS NLEDQCTHRY KIYIEGEAWS VSEKYILSCD SMTLLVKPEY HDFFIRSMIP MKHYWPIRQN NKCGDLKFAV
401: EWGNNNTDKA QVIGRQGSDY IMKNLEMKYV YDYMFYVLQG YGKLMKLDVT VPENATEVCS ETMACPITDG RLIRQCMDDS LVMSPSVKAA CNLPKPYGDY
501: ELKRILKKRQ SAERKVMKWT DEYWNLRSGK

Best Arabidopsis Sequence Match ( AT3G61280.1 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYKIYI EGNAWSVSEK YILSCDSMTL LVKPEYYDFF FRSMVPMKHF WPIRQNNKCG
401: DLKFAVEWGN NNTEKAQIIG RQGSEYMMKN LKMKYVYDYM LYVLQGYGKL MKLDVTVPEN ATEVCSETMA CSITDGGRIR QCMDDSLVMS PSVKAACDLP
501: PSYGDYELKK FRKKQESAER KVEQWTNKYW NLRDPK

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.