CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

plastid 2
extracellular 4
golgi 4
plasma membrane 5
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48168	Soybean	plasma membrane	84.6	85.11
KRH65090	Soybean	extracellular	74.0	77.73
KRH40487	Soybean	cytosol	42.4	61.1
KRH00707	Soybean	cytosol	44.6	60.93
VIT_15s0046g03140.t01	Wine grape	cytosol	26.8	57.51
KRH65106	Soybean	cytosol	19.2	55.49
GSMUA_Achr5P12260_001	Banana	mitochondrion	41.0	53.95
CDX71752	Canola	cytosol	44.8	52.09
Bra007591.1-P	Field mustard	cytosol	44.0	51.16
VIT_15s0046g03130.t01	Wine grape	cytosol	22.2	50.0
KRH08971	Soybean	cytosol	23.8	49.79
KRH65107	Soybean	cytosol	15.2	49.67
Bra007592.1-P	Field mustard	cytosol	33.2	49.55
VIT_15s0046g03100.t01	Wine grape	mitochondrion	12.6	49.22
KRH48182	Soybean	cytosol, golgi, plasma membrane	50.0	49.02
AT3G61290.1	Thale cress	cytosol	42.8	47.03
Os02t0642700-01	Rice	plastid	44.4	46.84
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	48.8	46.74
KRH09038	Soybean	cytosol	25.2	46.67
KRH08981	Soybean	plastid	35.4	46.58
CDX89107	Canola	mitochondrion	42.6	46.51
KRH08960	Soybean	plastid	19.2	45.93
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	45.6	45.88
KRH09051	Soybean	cytosol, nucleus, plasma membrane	24.4	45.19
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	44.6	44.42
KRH09011	Soybean	cytosol	47.4	44.38
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	41.2	43.92
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	45.6	43.43
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	41.4	43.22
CDY48930	Canola	plasma membrane	45.6	43.02
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	45.6	43.02
CDX71750	Canola	plasma membrane	44.0	42.31
CDX71749	Canola	cytosol, golgi, plasma membrane	36.2	41.71
Zm00001d002836_P006	Maize	plastid	45.0	41.59
KRG88606	Soybean	cytosol	17.8	41.4
EES07545	Sorghum	plastid	45.6	41.3
AT3G61280.1	Thale cress	plasma membrane	44.2	41.23
Zm00001d051287_P001	Maize	plastid	45.4	41.2
TraesCSU01G025200.1	Wheat	plastid	46.0	40.85
AT2G45840.1	Thale cress	plasma membrane	42.6	40.73
CDY18896	Canola	golgi, plasma membrane, plastid	32.0	40.61
EES11181	Sorghum	plastid	45.0	40.54
KRH38478	Soybean	cytosol	47.0	40.03
KRH08953	Soybean	cytosol, extracellular, nucleus	11.6	40.0
TraesCS2B01G386200.1	Wheat	plastid	43.8	39.6
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	36.4	39.22
TraesCS2D01G365600.1	Wheat	plastid	43.4	39.1
CDY48931	Canola	plasma membrane	25.4	38.72
TraesCS2A01G368900.2	Wheat	plastid	42.6	38.38
Os04t0534100-01	Rice	mitochondrion	33.0	37.67
TraesCS6B01G266000.1	Wheat	plastid	46.0	37.64
KRG88612	Soybean	cytosol	21.0	37.5
KRH30306	Soybean	plastid	36.0	36.29
KRG88496	Soybean	cytosol	11.8	33.71
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	11.4	31.32
CDY42493	Canola	cytosol	41.8	24.16

Protein Annotations

EntrezGene:100813234	MapMan:35.2	UniProt:A0A0R0KMU8	EMBL:ACUP02001311	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G012900
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlants:KRH65092	ProteinID:KRH65092	ProteinID:KRH65092.1
InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF58	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI0006EE08A0	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:1306345..1315787

Molecular Weight (calculated)

58549.6 Da

IEP (calculated)

8.186

GRAVY (calculated)

-0.299

Length

500 amino acids

Sequence
(BLAST)

001: MACSPSLSSL CLLQPISLPT GLTYIMTRWT FFSVILLAAF VASTFFLEID LFRITTTTIL KTNIVFNRQQ PQFPLNCTNE KLATTCPSYY PTKFQFYDNS
101: STTSCPEYFR WIHEDLKPWE SSGITRDMIE RGKNISHFRL VIVNGKAYIE KFAKSYQTRD VFTIWGILQL LRLYPGKVPD LELMFHCGDK TVVFKKDFQG
201: PQMSPPPVFH YCGEENSYDI VFPDWTFWGW AELSIRPWET TLHNIQEGNK MVKWKDRIPY AFWKGNPKVS IIRRELGKCN VTEKQDWNAR IYDIQWLQER
301: ASNFENSKLE NQCTFRYKIY AEGATWSVSE KYIIACDSMT MFIEPKYYDF FTRNMLPLRH YWPISTKNMC EEIKYAVDWG NAHLDHAQAI GDGGTNYILE
401: NLKMKFVYDY MFHLLNNYSK LLKFKPTIPI GAVEICSESM ACSLHGQRKH FMVESMVISP SDTPPCILPP PYTPETLKEF LQEKENLIKQ VKTRVINTKQ

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.