Factsheet for AT2G45840.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18896	Canola	golgi, plasma membrane, plastid	55.07	73.1
AT3G61290.1	Thale cress	cytosol	57.94	66.59
AT3G61280.1	Thale cress	plasma membrane	61.95	60.45
VIT_15s0046g03100.t01	Wine grape	mitochondrion	13.58	55.47
VIT_15s0046g03140.t01	Wine grape	cytosol	23.52	52.79
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.28	51.32
KRH40487	Soybean	cytosol	32.31	48.7
VIT_15s0046g03130.t01	Wine grape	cytosol	20.46	48.2
AT2G45830.1	Thale cress	mitochondrion	47.23	47.23
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	43.59	45.78
KRH00707	Soybean	cytosol	31.74	45.36
Os02t0642700-01	Rice	plastid	40.92	45.15
KRH65090	Soybean	extracellular	40.92	44.96
KRH48168	Soybean	plasma membrane	41.49	43.66
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	41.3	43.46
AT3G48980.2	Thale cress	plastid	44.74	42.94
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	40.92	42.63
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	40.73	42.6
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	43.79	42.25
EES07545	Sorghum	plastid	43.98	41.67
Zm00001d051287_P001	Maize	plastid	43.59	41.38
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	36.71	40.94
AT1G63420.1	Thale cress	mitochondrion	44.74	40.48
Zm00001d002836_P006	Maize	plastid	41.68	40.3
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.71	40.08
Os04t0534100-01	Rice	mitochondrion	33.46	39.95
EES11181	Sorghum	plastid	41.49	39.1
TraesCS2B01G386200.1	Wheat	plastid	41.3	39.06
TraesCS2A01G368900.2	Wheat	plastid	41.3	38.92
TraesCSU01G025200.1	Wheat	plastid	41.87	38.9
TraesCS2D01G365600.1	Wheat	plastid	41.11	38.74
TraesCS6B01G266000.1	Wheat	plastid	43.4	37.15
AT1G07220.1	Thale cress	mitochondrion	35.37	36.49

Protein Annotations

MapMan:35.2	EntrezGene:819192	ProteinID:AEC10608.1	ArrayExpress:AT2G45840	EnsemblPlantsGene:AT2G45840	RefSeq:AT2G45840
TAIR:AT2G45840	RefSeq:AT2G45840-TAIR-G	EnsemblPlants:AT2G45840.1	TAIR:AT2G45840.1	ncoils:Coil	UniProt:F4IH52
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006629	GO:GO:0006664
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0046527	EMBL:KJ138852	InterPro:LipoPS_modifying	RefSeq:NP_182108.2	PFAM:PF05686
PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI000034EE9A	SEG:seg

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4IH52]

Coordinates

chr2:+:18869153..18871786

Molecular Weight (calculated)

61513.0 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.542

Length

523 amino acids

Sequence
(BLAST)

001: MSSHVVDDQR QPNNSISSLS SKLTKPWITT TIFIFVFFFF IILVGASLRW MDMFLIGGGR IKVTPIFTRN TNATIPKEKL TTPLNFTLQC SLDQNIATQT
101: CPASNPEKSQ PSKDEPETCP DYFRWIHKDL EAWRETGITR ETLERASDKA HFRLIIKGGR VYVHQYKKSF QTRDVFTIWG IVQLLRMYPG QVPDLELLFM
201: CHDSPEIWRR DYRPRPGVNV TWPPPPLFHY CGHSGAFDIV FPDWSFWGWP EINIKEWNKQ SELISEGIKK VKWEEREPYA YWKGNPGVAM VRRDLMHCHD
301: PMVHLYRQDW SREGRIGYRT SNLEDQCTHR YKIYVEGRAW SVSEKYILAC DSMTLLVKPF YFDFFTRSLV PMEHYWPIRP QEKCSDIVFA VHWGNNNTKK
401: ARAIGRNGSG YVRKNLKMKY VYDYMLHLLQ SYGKLMKMNV EVPQGAKEVC PETMACPING GRMRQSMDDS LVMSPSVKAT CEMPPPFEED ELKKFLEKKE
501: SVEKEVEKWT NEYWQEQKKI LKH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.