Factsheet for VIT_15s0046g03130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g03100.t01	Wine grape	mitochondrion	40.09	69.53
VIT_15s0046g03140.t01	Wine grape	cytosol	57.66	54.94
VIT_02s0025g03710.t01	Wine grape	cytosol	55.86	45.59
VIT_16s0050g00190.t01	Wine grape	nucleus	55.86	44.29
VIT_15s0046g03110.t01	Wine grape	cytosol	57.66	34.04
GSMUA_Achr5P12260_001	Banana	mitochondrion	51.35	30.0
Bra007592.1-P	Field mustard	cytosol	45.05	29.85
VIT_15s0046g03050.t01	Wine grape	cytosol	50.0	26.24
VIT_15s0046g03080.t01	Wine grape	cytosol	48.65	25.53
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	57.21	25.45
VIT_15s0046g03150.t01	Wine grape	golgi	59.01	25.24
VIT_15s0046g03120.t01	Wine grape	cytosol	48.2	24.83
Bra007591.1-P	Field mustard	cytosol	47.75	24.65
CDX71752	Canola	cytosol	47.3	24.42
KRH65090	Soybean	extracellular	50.9	23.74
KRH48168	Soybean	plasma membrane	51.35	22.94
KRH40487	Soybean	cytosol	35.59	22.77
CDX89107	Canola	mitochondrion	46.4	22.49
AT3G61290.1	Thale cress	cytosol	45.95	22.42
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.0	22.2
Os02t0642700-01	Rice	plastid	46.85	21.94
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	45.95	21.75
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	46.4	21.5
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.75	21.33
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.75	21.12
AT2G45840.1	Thale cress	plasma membrane	48.2	20.46
VIT_15s0046g03070.t01	Wine grape	golgi	48.2	20.38
CDX71750	Canola	plasma membrane	45.95	19.62
Zm00001d002836_P006	Maize	plastid	47.75	19.59
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	47.3	19.55
AT3G61280.1	Thale cress	plasma membrane	46.4	19.22
TraesCS2B01G386200.1	Wheat	plastid	47.75	19.17
TraesCS2D01G365600.1	Wheat	plastid	47.75	19.1
CDY48930	Canola	plasma membrane	45.5	19.06
TraesCS2A01G368900.2	Wheat	plastid	47.3	18.92
EES11181	Sorghum	plastid	47.3	18.92
Zm00001d051287_P001	Maize	plastid	46.85	18.87
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	45.05	18.87
TraesCSU01G025200.1	Wheat	plastid	47.75	18.83
EES07545	Sorghum	plastid	46.4	18.66
KRH00707	Soybean	cytosol	29.73	18.03
TraesCS6B01G266000.1	Wheat	plastid	47.3	17.18
VIT_06s0004g06630.t01	Wine grape	plasma membrane	34.68	16.59
CDX71749	Canola	cytosol, golgi, plasma membrane	26.58	13.59
VIT_15s0046g03060.t01	Wine grape	cytosol	6.31	11.76
CDY42493	Canola	cytosol	45.5	11.68
CDY18896	Canola	golgi, plasma membrane, plastid	20.72	11.68
Os04t0534100-01	Rice	mitochondrion	22.97	11.64
CDY48931	Canola	plasma membrane	1.35	0.91
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	0.9	0.9

Protein Annotations

MapMan:35.2	EMBL:AM472559	ProteinID:CAN70599	ProteinID:CAN70599.1	ProteinID:CCB62393	ProteinID:CCB62393.1
UniProt:F6I5Z7	EMBL:FN596755	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505
GO:GO:0016740	GO:GO:0046527	InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59
SMART:SM00672	UniParc:UPI000210AB4F	ArrayExpress:VIT_15s0046g03130	EnsemblPlantsGene:VIT_15s0046g03130	EnsemblPlants:VIT_15s0046g03130.t01	SEG:seg

Description

No Description!

Coordinates

chr15:-:19739211..19741610

Molecular Weight (calculated)

25872.1 Da

IEP (calculated)

6.940

GRAVY (calculated)

-0.434

Length

222 amino acids

Sequence
(BLAST)

001: MTLDAMNNLE LWMTLATLDL KLKALNAMNN SRYKIYVEGW GWSVSEKYVL ACDSMTLLTK PYHHDFFTRS MVPLQHYWPI RPRNKCRDLK FAVEWGNTHP
101: EKAQEIGKAG SNFIHEDLKM DFVYDYMFHL LNEYSKLLKF KPAVPPGAVE LCLETMDCSA DAVLQKFVME STVNSPTDSA PCSMPPHYSP ESFRAFLNKK
201: ENLTRQVEMW GHAYWENQNK QL

Best Arabidopsis Sequence Match ( AT2G45830.2 )
(BLAST)

001: MLEKARRTAH FRVVILDGRV YVKKYRKSIQ TRDVFTLWGI VQLLRWYPGR LPDLELMFDP DDRPTVRSKD FQGQQHPAPP PLFRYCSDDA SLDIVFPDWS
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.