CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71752	Canola	cytosol	76.64	81.63
AT3G61290.1	Thale cress	cytosol	79.91	80.44
CDX71750	Canola	plasma membrane	74.67	65.77
CDY48930	Canola	plasma membrane	74.45	64.34
VIT_15s0046g03100.t01	Wine grape	mitochondrion	17.03	60.94
CDX71749	Canola	cytosol, golgi, plasma membrane	55.9	58.99
CDY48931	Canola	plasma membrane	39.52	55.18
VIT_15s0046g03140.t01	Wine grape	cytosol	27.95	54.94
CDY42493	Canola	cytosol	95.2	50.4
KRH40487	Soybean	cytosol	37.34	49.28
CDY69828	Canola	mitochondrion	41.27	49.22
GSMUA_Achr5P12260_001	Banana	mitochondrion	40.83	49.21
CDY18896	Canola	golgi, plasma membrane, plastid	41.7	48.48
VIT_15s0046g03130.t01	Wine grape	cytosol	22.49	46.4
KRH00707	Soybean	cytosol	36.24	45.36
KRH65090	Soybean	extracellular	46.51	44.75
CDY45704	Canola	endoplasmic reticulum, golgi	47.82	43.98
CDX71753	Canola	endoplasmic reticulum	46.94	43.79
CDY48932	Canola	endoplasmic reticulum	46.94	43.79
CDY58789	Canola	endoplasmic reticulum, golgi	47.6	43.78
KRH48168	Soybean	plasma membrane	46.94	43.26
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	46.51	42.6
Os02t0642700-01	Rice	plastid	43.45	41.98
CDX88050	Canola	plastid	48.69	41.76
CDY37069	Canola	golgi	47.16	41.3
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	47.6	41.29
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	45.85	41.1
CDX80388	Canola	plastid	47.82	40.93
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	44.1	40.64
CDY05887	Canola	golgi	48.47	40.59
CDY08097	Canola	plastid	48.47	40.59
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	43.01	39.24
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	39.52	38.59
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	40.17	38.41
Zm00001d051287_P001	Maize	plastid	45.41	37.75
EES07545	Sorghum	plastid	45.41	37.68
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	51.97	37.3
Zm00001d002836_P006	Maize	plastid	43.45	36.78
Os04t0534100-01	Rice	mitochondrion	34.72	36.3
EES11181	Sorghum	plastid	43.89	36.22
CDY10259	Canola	mitochondrion	39.3	35.79
TraesCSU01G025200.1	Wheat	plastid	43.89	35.7
CDY06688	Canola	mitochondrion	38.86	35.32
CDY25494	Canola	mitochondrion	44.32	35.06
CDY09932	Canola	endoplasmic reticulum, golgi	38.43	34.92
TraesCS2B01G386200.1	Wheat	plastid	42.14	34.9
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	38.43	34.65
TraesCS2A01G368900.2	Wheat	plastid	41.92	34.59
TraesCS2D01G365600.1	Wheat	plastid	41.48	34.23
TraesCS6B01G266000.1	Wheat	plastid	44.76	33.55

Protein Annotations

EnsemblPlants:CDX89107	EnsemblPlantsGene:GSBRNA2T00149243001	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28
PFAM:PF05686	ProteinID:CDX89107	ProteinID:CDX89107.1	SMART:SM00672	UniParc:UPI0004EEBD29	MapMan:35.2

Description

BnaA04g00790D

Coordinates

chrLK031857:+:1087188..1089483

Molecular Weight (calculated)

54113.5 Da

IEP (calculated)

7.034

GRAVY (calculated)

-0.636

Length

458 amino acids

Sequence
(BLAST)

001: MMATSIVAST KKTIKIPLNC KDTTQTCPLN YPSRFKPAIS SSETCPDYFR WIHQDLKVWQ ETGITRETLE RAKPNAHFRL VIKSGRLYIH QYDKCYQTRD
101: VFTIWGILQL LKMYPGQVPD LELLFLCHDQ PGIWKKDFTQ EGPNATWPPP PLFHYCSHCD AYDIVFPDWS FWGWPEVNVK EWTTLQVAIR EANERVRWKD
201: RVQYAHWKGN SYVSQERRDL MQCNFSDKYD PMVHLYEQDW EKERENGFKS SNLEDQCTHR YKIYIEGRAW SVSKKYILAC DSMALLVKPE FFDFFGRSMV
301: PMEHYWPIRP QESCRDLKFA VEWGNNNTEK AQEIGRRGSE YMMKRLEMKY VYDYMLYVLQ GYGKLMRLDV TVPDNATEVC SETMACPITD GGLIRQCMDD
401: SLVTYPSVKA ACDLPQPYGD DELKRFLKNQ ESAERHVEKL TNDYWEVQNK ILQKGKNV

Best Arabidopsis Sequence Match ( AT3G61290.1 )
(BLAST)

001: MMTTSILTTT NTIIKIPLKC NATQTCPSTY PSRLEPMISS LETCPDYFRW IQQDLKVWEE TGITRETLER AKPKAHFRLV IKSGRLYVHQ YDKAYESRDV
101: LTIWGILQLL RMYPGQVPDL ELLFFCHDIP AIWKRDFRQP EPNATWPPPP LFQYCGHREA YGIVFPDWSF WGWPEVNIKE WTKLSVAIRE ANKRVKWNDR
201: VPYAYWKGNS GVHRERGNLM KCNFSDKYDP MVRLYEQDWG KEREIGFKSS NLEDQCTHRY KIYIEGRAWS VSKKYILACD SMTLLIKAEY FDFFGRSLVP
301: LEHYWPIKSH EKCGDLKFAV EWGNNNTKKA QVIGRQGSDY IMKNLEMKYV YDYMLYVLQG YGKLMKLDVT VPENATEVCS ETMACPITDG GLIRQCMDDS
401: LVMSPSVKSA CDLPRPYRDD ELKRFLEKQE SAERKVEKWT NEYWEAQNKT FQQRK

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.