CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027639.1-P	Field mustard	mitochondrion	97.93	98.1
AT1G63420.1	Thale cress	mitochondrion	84.8	84.95
VIT_02s0025g03710.t01	Wine grape	cytosol	28.84	61.4
GSMUA_Achr5P12260_001	Banana	mitochondrion	36.79	56.05
CDY69828	Canola	mitochondrion	35.92	54.17
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	48.53	53.83
PGSC0003DMT400000701	Potato	mitochondrion	7.08	53.25
CDX71752	Canola	cytosol	37.13	50.0
CDY48932	Canola	endoplasmic reticulum	41.8	49.29
CDX71753	Canola	endoplasmic reticulum	41.8	49.29
Os02t0642700-01	Rice	plastid	40.24	49.16
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	18.65	48.87
CDY58789	Canola	endoplasmic reticulum, golgi	41.28	47.99
CDY45704	Canola	endoplasmic reticulum, golgi	40.93	47.59
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	40.59	46.81
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	39.9	46.48
CDX88050	Canola	plastid	42.31	45.88
TraesCS2D01G365600.1	Wheat	plastid	43.7	45.59
CDY37069	Canola	golgi	41.11	45.51
CDX80388	Canola	plastid	41.97	45.42
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	36.79	45.42
TraesCS2B01G386200.1	Wheat	plastid	43.01	45.03
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	39.72	45.01
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	40.59	44.51
EES07545	Sorghum	plastid	42.31	44.38
TraesCS2A01G368900.2	Wheat	plastid	42.49	44.32
CDX89107	Canola	mitochondrion	35.06	44.32
Zm00001d051287_P001	Maize	plastid	42.14	44.28
Zm00001d002836_P006	Maize	plastid	41.28	44.18
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.44	44.05
CDY05887	Canola	golgi	41.45	43.88
CDY08097	Canola	plastid	41.45	43.88
EES11181	Sorghum	plastid	41.8	43.6
CDX71750	Canola	plasma membrane	38.86	43.27
CDY18896	Canola	golgi, plasma membrane, plastid	29.36	43.15
CDY48930	Canola	plasma membrane	38.86	42.45
TraesCSU01G025200.1	Wheat	plastid	40.76	41.92
Os04t0534100-01	Rice	mitochondrion	31.61	41.78
CDX71749	Canola	cytosol, golgi, plasma membrane	30.92	41.24
TraesCS6B01G266000.1	Wheat	plastid	42.14	39.93
CDY10259	Canola	mitochondrion	34.2	39.36
CDY06688	Canola	mitochondrion	34.02	39.09
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	33.85	38.58
CDY09932	Canola	endoplasmic reticulum, golgi	33.16	38.1
CDY48931	Canola	plasma membrane	20.73	36.59
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	38.86	35.27
CDY42493	Canola	cytosol	35.23	23.58

Protein Annotations

MapMan:35.2	GO:A0A078GJR2	UniProt:A0A078GJR2	EnsemblPlants:CDY25494	ProteinID:CDY25494	ProteinID:CDY25494.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00032727001	InterPro:LipoPS_modifying	PFAM:PF05686
PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EE60C2	SEG:seg

Description

BnaC09g11190DBnaC09g11190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJR2]

Coordinates

chrLK032176:+:80617..84954

Molecular Weight (calculated)

66865.8 Da

IEP (calculated)

9.522

GRAVY (calculated)

-0.567

Length

579 amino acids

Sequence
(BLAST)

001: MTSLFSKPRA LTSLVSHFKT YRPITGKLHV ATLTLLLFLV AAAVAVTSSL WLSKTTKQFD RPTLVTTKPV PDLESPQKTG VLVNCTSLLN QNRSGSCSRT
101: SLWLNKTKSY NPPTIITTKP VHAPVPVPEK KSTKKTRISV DCTSFSNQNR SGSCSRTPQP GYNNNQTESN RACPDYFKWI HEDLKPWRET GITREMVERG
201: QTTAHFRLLI VNGKVFVENY KKSIQTRDAF TLWGILQLLR KYPGKLPDVD LMFDCDDRPV IRSDGYDKSN LTAENAPPVL FRYGGDRWTA DIVFPDWSFW
301: GWQEINIKPW SKVLKEMEEG KKKKKFMERE SYAYWKGNPF VASPSREDLL TCNLSSQHDW NARIFIQDWI SEGQKGFENS NVADQCTYRY KIYIEGYGWS
401: VSEKYILACD SVTLMVKPYY YDFFSRTLQP LQHYWPINDK NKCRSIKFAV EWLNNHTQKA QEIGRGASEF MQRDLSMENV YDYMFHLLNE YSKLLKFKPQ
501: VSQNSVEICT EAMVCPSGNA NGTNKRFLMG SLVDEPHISG PCSLPPPFDP NGLEKFHRKK LNLIRQVEKW EHAYWKNVQ

Best Arabidopsis Sequence Match ( AT1G63420.1 )
(BLAST)

001: MTSLFSKPRA LTSHITNFKT YRPVIGKLHV ATLTLLLFLI AAGIAVTSSL WLNKTTKAFD RPTLVATKPE PELEPPHETG VLVNCTSFLN QNRSGSCSRT
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I232]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.