Factsheet for PGSC0003DMT400000701

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	57.14	19.91
GSMUA_Achr5P12260_001	Banana	mitochondrion	58.44	11.84
Os04t0534100-01	Rice	mitochondrion	57.14	10.05
Os02t0642700-01	Rice	plastid	59.74	9.7
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	59.74	9.6
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	58.44	9.59
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	59.74	9.26
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	59.74	9.16
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	59.74	8.95
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	57.14	8.43
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	49.35	8.21
TraesCSU01G025200.1	Wheat	plastid	59.74	8.17
Zm00001d051287_P001	Maize	plastid	58.44	8.17
TraesCS2D01G365600.1	Wheat	plastid	58.44	8.11
TraesCS2B01G386200.1	Wheat	plastid	57.14	7.96
Zm00001d002836_P006	Maize	plastid	55.84	7.95
TraesCS2A01G368900.2	Wheat	plastid	57.14	7.93
EES11181	Sorghum	plastid	57.14	7.93
EES07545	Sorghum	plastid	55.84	7.79
TraesCS6B01G266000.1	Wheat	plastid	59.74	7.53
AT1G63420.1	Thale cress	mitochondrion	55.84	7.44
Bra027639.1-P	Field mustard	mitochondrion	53.25	7.09
CDY25494	Canola	mitochondrion	53.25	7.08
PGSC0003DMT400000098	Potato	cytosol	51.95	4.61
PGSC0003DMT400055754	Potato	nucleus	0.0	0.0
VIT_02s0025g03710.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400000701	EnsemblPlantsGene:PGSC0003DMG400000252	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686
PGSC:PGSC0003DMG400000252	UniParc:UPI000295DD27	UniProt:M0ZH68	MapMan:35.2	:	:

Description

KDEL motif-containing protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000252]

Coordinates

chr1:+:71280779..71281974

Molecular Weight (calculated)

9457.4 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.392

Length

77 amino acids

Sequence
(BLAST)

1: MLKRYFQSRH LFTMYGIVQL LRWYPGKLPN LEIMFKIENW PAKHYQRPNS GPPPLFSYCS DWQSLDIVFP DWSFWGW

Best Arabidopsis Sequence Match ( AT2G45830.2 )
(BLAST)

001: MLEKARRTAH FRVVILDGRV YVKKYRKSIQ TRDVFTLWGI VQLLRWYPGR LPDLELMFDP DDRPTVRSKD FQGQQHPAPP PLFRYCSDDA SLDIVFPDWS
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.