Factsheet for TraesCS2A01G368900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G386200.1	Wheat	plastid	91.89	92.22
TraesCS2D01G365600.1	Wheat	plastid	91.89	91.89
Os04t0534100-01	Rice	mitochondrion	58.74	74.43
Zm00001d002836_P006	Maize	plastid	72.25	74.12
EES11181	Sorghum	plastid	74.05	74.05
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.13	67.37
VIT_16s0050g00190.t01	Wine grape	nucleus	32.79	65.0
VIT_02s0025g03710.t01	Wine grape	cytosol	29.91	61.03
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	50.45	59.7
KRH08971	Soybean	cytosol	25.59	59.41
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	52.61	58.52
KRH65106	Soybean	cytosol	17.84	57.23
VIT_15s0046g03110.t01	Wine grape	cytosol	38.74	57.18
PGSC0003DMT400000701	Potato	mitochondrion	7.93	57.14
KRH09038	Soybean	cytosol	27.21	55.93
VIT_15s0046g03120.t01	Wine grape	cytosol	42.88	55.22
CDY69828	Canola	mitochondrion	37.3	53.91
VIT_15s0046g03080.t01	Wine grape	cytosol	41.08	53.9
KRH08981	Soybean	plastid	36.58	53.42
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	49.37	53.31
VIT_15s0046g03050.t01	Wine grape	cytosol	40.54	53.19
KRH09051	Soybean	cytosol, nucleus, plasma membrane	25.77	52.96
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	49.01	52.92
VIT_15s0046g03140.t01	Wine grape	cytosol	22.16	52.79
Solyc03g025780.2.1	Tomato	golgi	47.75	52.27
TraesCS2A01G369000.1	Wheat	golgi	43.06	51.84
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	46.49	51.81
VIT_15s0046g03100.t01	Wine grape	mitochondrion	11.71	50.78
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	47.93	50.67
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	48.83	50.0
Bra009709.1-P	Field mustard	plastid	47.93	49.81
VIT_15s0046g03150.t01	Wine grape	golgi	46.49	49.71
KRH09011	Soybean	cytosol	47.57	49.44
CDX88050	Canola	plastid	47.57	49.44
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	41.98	49.36
CDX80388	Canola	plastid	47.39	49.16
KRH08953	Soybean	cytosol, extracellular, nucleus	12.79	48.97
Bra018021.1-P	Field mustard	golgi	47.21	48.52
CDY48932	Canola	endoplasmic reticulum	42.88	48.47
KRH65107	Soybean	cytosol	13.33	48.37
Bra007590.1-P	Field mustard	cytosol	42.7	48.27
CDX71753	Canola	endoplasmic reticulum	42.7	48.27
CDY08097	Canola	plastid	47.39	48.08
AT3G48980.2	Thale cress	plastid	47.21	48.07
CDX71752	Canola	cytosol	37.12	47.91
Bra007591.1-P	Field mustard	cytosol	37.12	47.91
CDY05887	Canola	golgi	47.21	47.9
Bra007592.1-P	Field mustard	cytosol	28.83	47.76
CDY45704	Canola	endoplasmic reticulum, golgi	42.7	47.59
KRH48182	Soybean	cytosol, golgi, plasma membrane	43.6	47.45
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	42.52	47.39
CDY58789	Canola	endoplasmic reticulum, golgi	42.52	47.39
KRH08960	Soybean	plastid	17.84	47.37
VIT_15s0046g03130.t01	Wine grape	cytosol	18.92	47.3
VIT_15s0046g03070.t01	Wine grape	golgi	44.5	47.05
CDY37069	Canola	golgi	44.32	47.04
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	44.14	46.93
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	44.32	46.59
KRG88606	Soybean	cytosol	18.02	46.51
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	41.44	46.18
KRH40487	Soybean	cytosol	28.83	46.11
KRH65090	Soybean	extracellular	39.46	46.01
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	42.16	45.79
KRG88612	Soybean	cytosol	23.06	45.71
AT2G45830.1	Thale cress	mitochondrion	43.06	45.7
KRH38478	Soybean	cytosol	47.21	44.63
AT3G61290.1	Thale cress	cytosol	36.4	44.4
KRH48168	Soybean	plasma membrane	38.38	42.86
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	41.44	42.83
PGSC0003DMT400055754	Potato	nucleus	11.71	42.76
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	38.38	42.6
AT1G63420.1	Thale cress	mitochondrion	44.32	42.56
CDY25494	Canola	mitochondrion	44.32	42.49
Bra027639.1-P	Field mustard	mitochondrion	44.14	42.39
Bra039310.1-P	Field mustard	golgi, mitochondrion	32.97	42.36
KRH00707	Soybean	cytosol	27.93	42.35
VIT_15s0046g03060.t01	Wine grape	cytosol	9.01	42.02
CDX89107	Canola	mitochondrion	34.59	41.92
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	38.56	41.72
CDY18896	Canola	golgi, plasma membrane, plastid	29.37	41.37
AT2G45840.1	Thale cress	plasma membrane	38.92	41.3
CDX71750	Canola	plasma membrane	38.38	40.96
CDX71749	Canola	cytosol, golgi, plasma membrane	31.89	40.78
Solyc05g048800.1.1	Tomato	cytosol	17.66	40.33
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	35.14	40.12
AT3G61280.1	Thale cress	plasma membrane	38.74	40.11
CDY48930	Canola	plasma membrane	38.02	39.81
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	38.02	39.81
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	15.32	38.46
TraesCS7A01G328500.1	Wheat	cytosol	39.1	38.34
KRG88496	Soybean	cytosol	12.07	38.29
CDY48931	Canola	plasma membrane	21.8	36.89
TraesCS7A01G328300.1	Wheat	endoplasmic reticulum	27.75	35.9
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	11.71	35.71
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	39.46	34.33
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	39.1	34.01
PGSC0003DMT400000098	Potato	cytosol	41.98	26.87
CDY42493	Canola	cytosol	34.59	22.2

Protein Annotations

EnsemblPlants:TraesCS2A01G368900.2	EnsemblPlantsGene:TraesCS2A01G368900	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF33
PFAM:PF05686	SEG:seg	SMART:SM00672	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr2A:-:612082289..612088102

Molecular Weight (calculated)

62531.6 Da

IEP (calculated)

9.851

GRAVY (calculated)

-0.357

Length

555 amino acids

Sequence
(BLAST)

001: MAMAVAPAGA VEGQRSSKLV AALSRTSATF LFFSVVAVGA VAVSTRWITT NTTTLQASFP TTAAIPAAAA AVLHPKTQHP NPSPQSPSRQ PRPPPAAYSI
101: SCPVPSLRLN ISHAAKASKS SQTLALALSS PSSCRSSPDP PPATATAAGS SSNSSCPPYF RFIHEDLRPW RAAGGVTRAM LARARATASF RLVVLGGRAF
201: VQRFRPAFQT RDLFTIWGIL QLLRRYPGRV PDLDLMFDCV DWPVVRTHLY RGEHAPFMPP LFRYCGDDRT LDIVFPDWSF WGWPEINIKP WDALHKDLKD
301: GNSKVRWFSR EPYAYWKGNA AVATSRQELV KCNVSSTQDW NARIYTQDWF KESKEGYKTS DLGSQCTHRY KIYIEGSAWS ISQKYILACD SMTLLVTPKY
401: YDFFSRSLMP LQHYWPVRDN NKCASIQYAV NWGNSHKQLA QRIGKEASNF VEQEVNMDHV YDYMLHLLRE YAKLLSFKPT KPPEAVEVCP DSLVCQAEGT
501: ERKFLMESMV KSAHDSGPCD LPPPFSRREL TMLKRRKENS IRQVEMWERR ASITR

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.