Factsheet for Bra004942.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, plasma membrane, peroxisome, mitochondrion

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	96.08	96.08
AT2G45830.1	Thale cress	mitochondrion	56.9	69.41
Bra039310.1-P	Field mustard	golgi, mitochondrion	45.14	66.67
Bra007590.1-P	Field mustard	cytosol	47.49	61.71
VIT_15s0046g03110.t01	Wine grape	cytosol	35.89	60.9
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	47.34	60.64
Bra007592.1-P	Field mustard	cytosol	31.03	59.1
KRH65106	Soybean	cytosol	15.99	58.96
Bra007591.1-P	Field mustard	cytosol	39.19	58.14
GSMUA_Achr5P12260_001	Banana	mitochondrion	32.13	53.95
VIT_15s0046g03150.t01	Wine grape	golgi	42.63	52.41
KRH48182	Soybean	cytosol, golgi, plasma membrane	40.91	51.18
KRH65107	Soybean	cytosol	12.23	50.98
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	41.38	49.81
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	39.97	49.71
PGSC0003DMT400055754	Potato	nucleus	10.97	46.05
Os02t0642700-01	Rice	plastid	34.01	45.78
Solyc05g048800.1.1	Tomato	cytosol	17.24	45.27
Bra009709.1-P	Field mustard	plastid	36.99	44.19
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	33.86	43.46
Bra018021.1-P	Field mustard	golgi	36.52	43.15
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	33.86	43.03
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	30.56	41.58
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	30.56	40.71
EES07545	Sorghum	plastid	35.11	40.58
Os04t0534100-01	Rice	mitochondrion	27.74	40.41
TraesCS2D01G365600.1	Wheat	plastid	34.95	40.18
TraesCS2B01G386200.1	Wheat	plastid	34.8	40.14
Zm00001d002836_P006	Maize	plastid	34.01	40.11
Zm00001d051287_P001	Maize	plastid	34.64	40.11
TraesCS2A01G368900.2	Wheat	plastid	34.33	39.46
Bra027639.1-P	Field mustard	mitochondrion	35.27	38.93
EES11181	Sorghum	plastid	33.86	38.92
TraesCSU01G025200.1	Wheat	plastid	34.01	38.54
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	29.15	36.83
TraesCS6B01G266000.1	Wheat	plastid	34.95	36.5
Bra015563.1-P	Field mustard	mitochondrion	28.68	36.31

Protein Annotations

EnsemblPlants:Bra004942.1	EnsemblPlants:Bra004942.1-P	EnsemblPlantsGene:Bra004942	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SEG:seg
SMART:SM00672	TMHMM:TMhelix	UniParc:UPI00025480D0	UniProt:M4CL56	MapMan:35.2	:

Description

AT2G45830 (E=2e-242) DTA2 | DTA2 (DOWNSTREAM TARGET OF AGL15 2)

Coordinates

chrA05:+:2582125..2584923

Molecular Weight (calculated)

74768.3 Da

IEP (calculated)

8.727

GRAVY (calculated)

-0.678

Length

638 amino acids

Sequence
(BLAST)

001: MAQRKSTKGN NRDTQTNTHS NHASIKTSSH QGKRIAKATL LLVLSIFVSA GLLSFLCCFD YTTLTGPRQV TTTITKPPII TLHRFPRQCG VVQNQTQPVS
101: EDGTNKNKPR SNHSRPPTCP SYFRWIYEDL RPWRETGVTR EILEKARSKA HFRVIILDGR VYVKKYRRPI ETRDTFTLWG IVQLLQWYPG RLPDLELLFD
201: ADDRPTVRSI DYRGQQHPGP PPVFRYCSND ASLDIVFPDW SFWGWAELNI KPWAKSLVAI EEGNKMTQWE DRVPYAYWRG NPNVARTRKD LLRCNVSDQE
301: DWNTRLYIND WATEFKEGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLNVRP TYYDFLIRGM VPLQHYWPIR DLGKCRSLKH AVHWGNTHVD
401: QARKIGEEGS RYIREEVSME YVYDYMFHLM NEYAKLLKFK PEIPLGAKEI TTDSMGCPAK GRWRDFMAES MVMSPSEVSP CEMPLPYSPM ELREVLERKA
501: NLTRQVEVWE DQYYQAKTIG RNGSGYVLKY LQMKYVYDYM FHILQSYGKL MKMNVEVPEG AKEVCPETMA CPVKGGRMRQ YMDDSLILSP SNKGSCETPP
601: PFEDDELKKF LEKKKSVEKE VEKWTNEYWE EQNKSLQH

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.