Factsheet for Solyc05g048800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65106	Soybean	cytosol	29.63	41.62
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	60.49	28.66
VIT_15s0046g03150.t01	Wine grape	golgi	54.73	25.63
VIT_15s0046g03110.t01	Wine grape	cytosol	39.51	25.53
KRH48182	Soybean	cytosol, golgi, plasma membrane	50.62	24.12
Bra039310.1-P	Field mustard	golgi, mitochondrion	41.56	23.38
Bra007590.1-P	Field mustard	cytosol	45.68	22.61
CDY48932	Canola	endoplasmic reticulum	45.27	22.4
CDX71753	Canola	endoplasmic reticulum	45.27	22.4
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	46.91	22.18
Os04t0534100-01	Rice	mitochondrion	39.92	22.15
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	45.27	22.09
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	45.27	22.09
CDY58789	Canola	endoplasmic reticulum, golgi	45.27	22.09
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	44.86	21.89
CDY45704	Canola	endoplasmic reticulum, golgi	44.86	21.89
CDY69828	Canola	mitochondrion	34.16	21.61
AT2G45830.1	Thale cress	mitochondrion	46.09	21.41
Solyc03g025780.2.1	Tomato	golgi	44.44	21.3
CDY37069	Canola	golgi	44.86	20.84
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	43.62	20.74
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	44.86	20.64
Os02t0642700-01	Rice	plastid	39.92	20.46
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	39.51	20.34
GSMUA_Achr5P12260_001	Banana	mitochondrion	31.28	20.0
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	40.33	19.72
Solyc06g076980.2.1	Tomato	unclear	35.8	18.79
Zm00001d002836_P006	Maize	plastid	41.56	18.67
EES11181	Sorghum	plastid	41.98	18.38
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	36.63	17.73
TraesCS2D01G365600.1	Wheat	plastid	40.33	17.66
TraesCS2A01G368900.2	Wheat	plastid	40.33	17.66
TraesCS2B01G386200.1	Wheat	plastid	39.92	17.54
Zm00001d051287_P001	Maize	plastid	39.51	17.42
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	45.27	17.24
EES07545	Sorghum	plastid	39.09	17.21
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	44.44	16.93
TraesCSU01G025200.1	Wheat	plastid	38.68	16.7
TraesCS6B01G266000.1	Wheat	plastid	40.74	16.2
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	30.86	15.66
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	29.63	15.35
KRH65107	Soybean	cytosol	2.47	3.92
PGSC0003DMT400055754	Potato	nucleus	1.65	2.63

Protein Annotations

EnsemblPlants:Solyc05g048800.1.1	EnsemblPlantsGene:Solyc05g048800.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505
GO:GO:0016740	GO:GO:0046527	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686
SMART:SM00672	UniParc:UPI0002766E70	UniProt:K4C112	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5:-:59459742..59461138

Molecular Weight (calculated)

29285.9 Da

IEP (calculated)

8.727

GRAVY (calculated)

-0.760

Length

243 amino acids

Sequence
(BLAST)

001: MVPNLVFMEP YKKVENQSMK PHILEYPLDC NAWNKTNTCP STYPKSYKPL NPNNSTCPEY FRWIYEDLRH WKNTGITREM LEKSKKYTFV HDVWYCTTHP
101: GKLPNLEIMF DTDDRPVIPE RKFRRPDSGP PPLFRYCSDW QSLDIVFPDW SFWGWGETNI RPWRSMLKNI KEGNKRSKWK DRIPFAYWRG NPLVSHVRKD
201: LTKCNVTDKQ NWDTLLYTQV YFLDFLDHNF PLIFDIYFEI STX

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.