CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 2
golgi 3
plasma membrane 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	99.0	99.0
CDY45704	Canola	endoplasmic reticulum, golgi	96.39	96.39
CDY69828	Canola	mitochondrion	67.27	87.24
CDX71753	Canola	endoplasmic reticulum	82.93	84.11
CDY48932	Canola	endoplasmic reticulum	82.73	83.91
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	82.33	82.33
CDY37069	Canola	golgi	72.09	68.64
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	71.89	67.8
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	69.28	67.51
KRH65106	Soybean	cytosol	22.49	64.74
VIT_15s0046g03110.t01	Wine grape	cytosol	48.59	64.36
GSMUA_Achr5P12260_001	Banana	mitochondrion	45.38	59.47
VIT_15s0046g03150.t01	Wine grape	golgi	58.63	56.26
KRH65107	Soybean	cytosol	17.07	55.56
KRH48182	Soybean	cytosol, golgi, plasma membrane	55.22	53.92
CDX71752	Canola	cytosol	44.78	51.86
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	53.41	51.85
PGSC0003DMT400055754	Potato	nucleus	15.66	51.32
Os02t0642700-01	Rice	plastid	47.39	49.79
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.59	47.69
CDX89107	Canola	mitochondrion	43.78	47.6
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	60.64	47.34
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.39	47.01
CDX88050	Canola	plastid	50.0	46.63
CDX71749	Canola	cytosol, golgi, plasma membrane	40.56	46.54
CDX80388	Canola	plastid	49.4	45.98
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.97	45.63
Solyc05g048800.1.1	Tomato	cytosol	22.09	45.27
CDY48930	Canola	plasma membrane	47.59	44.72
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	42.97	44.68
Zm00001d002836_P006	Maize	plastid	47.79	43.99
CDX71750	Canola	plasma membrane	45.58	43.65
CDY08097	Canola	plastid	47.79	43.51
EES11181	Sorghum	plastid	48.39	43.42
Zm00001d051287_P001	Maize	plastid	47.99	43.38
CDY05887	Canola	golgi	47.59	43.33
EES07545	Sorghum	plastid	47.99	43.3
TraesCS2D01G365600.1	Wheat	plastid	48.19	43.24
TraesCS2B01G386200.1	Wheat	plastid	47.39	42.68
TraesCS2A01G368900.2	Wheat	plastid	47.39	42.52
Os04t0534100-01	Rice	mitochondrion	37.35	42.47
TraesCSU01G025200.1	Wheat	plastid	47.79	42.27
CDY25494	Canola	mitochondrion	47.99	41.28
CDY18896	Canola	golgi, plasma membrane, plastid	32.53	41.12
CDY09932	Canola	endoplasmic reticulum, golgi	39.76	39.29
CDY06688	Canola	mitochondrion	39.56	39.09
CDY10259	Canola	mitochondrion	39.36	38.97
TraesCS6B01G266000.1	Wheat	plastid	47.79	38.95
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	39.36	38.58
CDY48931	Canola	plasma membrane	25.1	38.11
CDY42493	Canola	cytosol	42.57	24.51

Protein Annotations

EnsemblPlants:CDY58789	EnsemblPlantsGene:GSBRNA2T00025143001	GO:A0A078J6V0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDY58789
ProteinID:CDY58789.1	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EE3582	UniProt:A0A078J6V0	MapMan:35.2

Description

BnaA07g38040DBnaA07g38040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6V0]

Coordinates

chrLK033699:+:11504..13537

Molecular Weight (calculated)

59086.2 Da

IEP (calculated)

7.730

GRAVY (calculated)

-0.620

Length

498 amino acids

Sequence
(BLAST)

001: MKTNNNDEQR KTLPFPGKYI LKSTVFIVVS LFISAALLGF LGYLNFNAFA GFKLMPKRFK PRFPYQCDVQ DQTHQIHFSQ NLTSRLHTSR SQPSSCPSYF
101: RWIHEDLRPW KETGITRNMV EKASKTAHFR LVIHRGKAYV KRYRKSIQTR DDFTLWGILQ LLRWYPGKLP DLDLMFDADD RPVVRSDDYT GQQNKDPPPL
201: FRYCSDDASL DIVFPDWSFW GWAEVNIKPW GESLEAIQEG NNITQWKDRV AYAYWRGNPY VDPTRGDLLK CNVSENEEWN TRLYVQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVY WGNTHVDKAR EIGELGSRFI REEVNMKYVY
401: DYMFHLLNEY AKLLKFKVKI PSDAEEITPE SLGCAATERW RDFMAESMVM SPSEEFPCEM VPPYDRLALK EVIERKANLT RQVELWEDQY FNDLANKP

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.