CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007591.1-P	Field mustard	cytosol	98.37	98.37
CDX89107	Canola	mitochondrion	81.63	76.64
CDX71750	Canola	plasma membrane	81.4	67.31
CDY48930	Canola	plasma membrane	82.79	67.17
CDX71749	Canola	cytosol, golgi, plasma membrane	61.16	60.6
VIT_15s0046g03100.t01	Wine grape	mitochondrion	17.67	59.38
CDY48931	Canola	plasma membrane	42.09	55.18
VIT_15s0046g03140.t01	Wine grape	cytosol	29.53	54.51
CDY69828	Canola	mitochondrion	47.21	52.86
KRH40487	Soybean	cytosol	42.33	52.45
GSMUA_Achr5P12260_001	Banana	mitochondrion	45.58	51.58
CDY18896	Canola	golgi, plasma membrane, plastid	45.81	50.0
KRH00707	Soybean	cytosol	40.47	47.54
VIT_15s0046g03130.t01	Wine grape	cytosol	24.42	47.3
KRH65090	Soybean	extracellular	51.4	46.43
CDX71753	Canola	endoplasmic reticulum	52.09	45.62
CDY48932	Canola	endoplasmic reticulum	52.09	45.62
KRH48168	Soybean	plasma membrane	52.33	45.27
CDY45704	Canola	endoplasmic reticulum, golgi	52.33	45.18
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	52.09	44.8
CDY58789	Canola	endoplasmic reticulum, golgi	51.86	44.78
Os02t0642700-01	Rice	plastid	49.3	44.73
CDY37069	Canola	golgi	53.95	44.36
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	53.95	43.94
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	51.86	43.64
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	49.3	42.66
CDX88050	Canola	plastid	52.09	41.95
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	45.12	41.36
CDY08097	Canola	plastid	52.33	41.13
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	45.81	41.13
CDX80388	Canola	plastid	51.16	41.12
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.67	40.84
CDY05887	Canola	golgi	51.86	40.77
CDY42493	Canola	cytosol	80.47	40.0
Os04t0534100-01	Rice	mitochondrion	40.0	39.27
Zm00001d002836_P006	Maize	plastid	49.3	39.19
Zm00001d051287_P001	Maize	plastid	50.0	39.02
EES07545	Sorghum	plastid	50.0	38.95
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	57.67	38.87
EES11181	Sorghum	plastid	48.84	37.84
TraesCS2B01G386200.1	Wheat	plastid	48.14	37.43
CDY25494	Canola	mitochondrion	50.0	37.13
TraesCS2A01G368900.2	Wheat	plastid	47.91	37.12
TraesCS2D01G365600.1	Wheat	plastid	47.91	37.12
TraesCSU01G025200.1	Wheat	plastid	48.14	36.77
CDY09932	Canola	endoplasmic reticulum, golgi	41.63	35.52
CDY10259	Canola	mitochondrion	41.4	35.39
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	41.63	35.24
TraesCS6B01G266000.1	Wheat	plastid	50.0	35.19
CDY06688	Canola	mitochondrion	41.16	35.12

Protein Annotations

EnsemblPlants:CDX71752	EnsemblPlantsGene:GSBRNA2T00155450001	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28
PFAM:PF05686	ProteinID:CDX71752	ProteinID:CDX71752.1	SMART:SM00672	UniParc:UPI0004EED4C1	MapMan:35.2

Description

BnaC08g31220D

Coordinates

chrLK031795:-:310989..312894

Molecular Weight (calculated)

50967.9 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.599

Length

430 amino acids

Sequence
(BLAST)

001: MTQTCPSNYP TKFEPAISSS ETCPDYFRWI QQDLKVWQET GITRETLERA KPNAHFRLVI KSGRLYVDHY DKAYQTRDVF TIWGILQLLR MYPGQVPDLE
101: LLFLCHDRPG IWKKYFRKED NATWPPPPLF HYCGHRDAYD IVFPDWSFWG WPEVNIKEWN KLSVAIKEGN KKVKWKDRVP YAYWKGNPMV SIARRNFMTC
201: NVSDKYDPMV RLYVQDWKRE TRAGFKGSNL EDQCTHRYKI YIEGNAWSVS EKYILACDSM TLLIKPEFYD FFVRSMIPME HYWPIRPNNC VDLKFAVEWG
301: NNNTDKAQVI GRQGSEYMLK NLEMKYVYDY MLYMLQGYGK LMKLDVTVPE NATEVCSETM ACPITDGGLI RQCMDDSLVM SPSVKPACNL PQPYEDGELK
401: RFLEKQENAE REVEKWTDEY WEVQSKILQQ

Best Arabidopsis Sequence Match ( AT3G61280.1 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYKIYI EGNAWSVSEK YILSCDSMTL LVKPEYYDFF FRSMVPMKHF WPIRQNNKCG
401: DLKFAVEWGN NNTEKAQIIG RQGSEYMMKN LKMKYVYDYM LYVLQGYGKL MKLDVTVPEN ATEVCSETMA CSITDGGRIR QCMDDSLVMS PSVKAACDLP
501: PSYGDYELKK FRKKQESAER KVEQWTNKYW NLRDPK

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.