CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	99.41	100.0
CDY09932	Canola	endoplasmic reticulum, golgi	95.67	96.43
CDY10259	Canola	mitochondrion	86.42	87.28
CDY06688	Canola	mitochondrion	86.42	87.1
AT1G07220.1	Thale cress	mitochondrion	86.42	86.59
GSMUA_Achr7P06580_001	Banana	cytosol	39.76	64.54
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	57.68	63.15
Solyc06g076980.2.1	Tomato	unclear	56.5	61.99
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	56.5	61.99
VIT_06s0004g06630.t01	Wine grape	plasma membrane	54.13	59.27
KRH30306	Soybean	plastid	57.09	58.47
Os05t0149500-01	Rice	extracellular	31.1	53.38
TraesCS1B01G117800.1	Wheat	mitochondrion	48.62	50.93
Zm00001d024854_P001	Maize	mitochondrion	48.03	50.83
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	48.62	50.82
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	48.23	50.41
EES17717	Sorghum	mitochondrion	48.43	49.5
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	48.82	48.34
CDY69828	Canola	mitochondrion	34.06	45.05
CDX71752	Canola	cytosol	35.24	41.63
CDY48932	Canola	endoplasmic reticulum	39.37	40.73
CDX71753	Canola	endoplasmic reticulum	38.98	40.33
CDY58789	Canola	endoplasmic reticulum, golgi	38.58	39.36
CDY45704	Canola	endoplasmic reticulum, golgi	38.19	38.96
CDX89107	Canola	mitochondrion	34.65	38.43
CDX88050	Canola	plastid	39.96	38.02
CDX80388	Canola	plastid	39.76	37.76
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	37.4	37.18
CDY37069	Canola	golgi	37.8	36.71
CDX71749	Canola	cytosol, golgi, plasma membrane	31.3	36.64
CDY05887	Canola	golgi	39.37	36.56
CDY08097	Canola	plastid	39.37	36.56
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	37.99	36.55
CDX71750	Canola	plasma membrane	37.2	36.35
CDY48930	Canola	plasma membrane	37.8	36.23
CDY25494	Canola	mitochondrion	38.58	33.85
CDY18896	Canola	golgi, plasma membrane, plastid	26.18	33.76
CDY48931	Canola	plasma membrane	21.46	33.23
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	36.42	29.0
CDY42493	Canola	cytosol	34.65	20.35

Protein Annotations

EnsemblPlants:CDY59071	EnsemblPlantsGene:GSBRNA2T00025503001	GO:A0A078J112	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDY59071	ProteinID:CDY59071.1
SEG:seg	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EE712F	UniProt:A0A078J112	MapMan:35.2

Description

BnaAnng15820DBnaAnng15820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J112]

Coordinates

chrLK033723:-:34554..36657

Molecular Weight (calculated)

58981.9 Da

IEP (calculated)

8.953

GRAVY (calculated)

-0.498

Length

508 amino acids

Sequence
(BLAST)

001: MGLRLRLPQK TSPRSPSYLL LCLLALSFFS FTALLFYKAS LVDDFIAQTK TLAGHNLEPT PWHIFPRKSF SEASRRSQAY RILQCSYFSC PYKPVIQPKS
101: LLSDSLSGRK TKQPKCPDVF RWIQRDLEPW GETGVTKEHV EKAKESAAFR VVILSGKLYV DLYYACVQSR MMFTVWGILQ LLNKYPGMVP DVDMMFDCMD
201: KPIINRTETH SFPAPLFRYC TNEAHLDIPF PDWSFWGWSE TNLRPWDDEF GDIKQGSKRS SWGSKQPRAY WKGNPDVVSP IRMELMKCNH SRLWGAQIMR
301: QNWAEEAKGG FEQSKLANQC NHRYKIYAEG YAWSVSLKYI MSCGSMTLII SPEYEDFFSR GLLPKENYWP VSTTDLCRSI KFAVDWGNAN PSDAEAIGKR
401: GQGYMESISM NRVYDYMFHL ITEYSKLQKF KPEKPYSAKE VCEGSLLCFA EQKERDLLEK SRAVPSLDRP CTLPDEDRSI LQRLIQQKKK TIEDVRHMEM
501: TRTERGSR

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.