Factsheet for GSMUA_Achr7P06580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0149500-01	Rice	extracellular	48.88	51.69
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	65.81	44.4
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	63.9	43.2
Solyc06g076980.2.1	Tomato	unclear	63.9	43.2
VIT_06s0004g06630.t01	Wine grape	plasma membrane	63.58	42.89
GSMUA_Achr5P12260_001	Banana	mitochondrion	50.16	41.32
CDY10259	Canola	mitochondrion	65.5	40.76
KRH30306	Soybean	plastid	64.54	40.73
Bra015563.1-P	Field mustard	mitochondrion	65.18	40.48
CDY06688	Canola	mitochondrion	65.18	40.48
GSMUA_Achr2P03920_001	Banana	mitochondrion	48.24	40.37
AT1G07220.1	Thale cress	mitochondrion	65.18	40.24
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	64.54	40.0
CDY09932	Canola	endoplasmic reticulum, golgi	64.22	39.88
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	64.54	39.76
GSMUA_Achr2P03930_001	Banana	cytosol	46.96	39.73
TraesCS1B01G117800.1	Wheat	mitochondrion	61.34	39.59
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	61.34	39.51
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	61.34	39.51
Zm00001d024854_P001	Maize	mitochondrion	60.06	39.17
EES17717	Sorghum	mitochondrion	61.02	38.43
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	61.98	37.82
GSMUA_Achr1P06820_001	Banana	mitochondrion	38.02	37.07
GSMUA_Achr4P05440_001	Banana	nucleus	45.69	32.8
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	45.37	26.95
GSMUA_Achr1P06810_001	Banana	mitochondrion	43.45	24.68
GSMUA_Achr2P03940_001	Banana	mitochondrion	45.05	23.46

Protein Annotations

EnsemblPlants:GSMUA_Achr7P06580_001	EnsemblPlants:GSMUA_Achr7T06580_001	EnsemblPlantsGene:GSMUA_Achr7G06580_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI000295E2D6	UniProt:M0TF98	MapMan:35.2	:	:	:

Description

DTA2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G06580_001]

Coordinates

chr7:-:4825150..4827710

Molecular Weight (calculated)

35716.6 Da

IEP (calculated)

7.420

GRAVY (calculated)

-0.349

Length

313 amino acids

Sequence
(BLAST)

001: MVAEAGRHAA MRVVILEGKR LFVDLYYACV QSRAMFTIWG LLHLLRRYPG MVPDNGSEYC PGNGGADGSH LPPPPPLFRY CATRDHLDIP FPDWSFWGWK
101: RARTAYWKGN PDVQSPIREA LFSSNDSKTW GAQIICQDWV EESRSGFQKS SLSNHCRHRY KIYAEGYAWS VSLKYIMACG SLALIIKPQY EDFFSRGLVP
201: KENYWPISPT DLCQSIKFAV EWGNQNPSKA EAIGKRGQAF MQELDMDHVY DYMYHLIVEY SKLQDFKPAP PSLAQEVCVE SILCLADKQQ RELLERSYAS
301: PSSSLPCTLF PPS

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.