Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- golgi 3
- plasma membrane 2
- vacuole 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59071 | Canola | endoplasmic reticulum, golgi, vacuole | 96.43 | 95.67 |
| CDY06688 | Canola | mitochondrion | 87.5 | 87.5 |
| CDY10259 | Canola | mitochondrion | 87.3 | 87.48 |
| AT1G07220.1 | Thale cress | mitochondrion | 86.71 | 86.19 |
| GSMUA_Achr7P06580_001 | Banana | cytosol | 39.88 | 64.22 |
| KRG98287 | Soybean | endoplasmic reticulum, golgi, vacuole | 58.13 | 63.15 |
| Solyc06g076980.2.1 | Tomato | unclear | 56.75 | 61.77 |
| PGSC0003DMT400078044 | Potato | endoplasmic reticulum, golgi, mitochondrion | 56.75 | 61.77 |
| VIT_06s0004g06630.t01 | Wine grape | plasma membrane | 54.96 | 59.7 |
| KRH30306 | Soybean | plastid | 57.54 | 58.47 |
| Os05t0149500-01 | Rice | extracellular | 31.15 | 53.04 |
| TraesCS1B01G117800.1 | Wheat | mitochondrion | 48.61 | 50.52 |
| TraesCS1A01G089800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 48.61 | 50.41 |
| Zm00001d024854_P001 | Maize | mitochondrion | 47.62 | 50.0 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 48.21 | 50.0 |
| EES17717 | Sorghum | mitochondrion | 48.41 | 49.09 |
| HORVU1Hr1G020420.2 | Barley | mitochondrion, plastid | 48.81 | 47.95 |
| CDY69828 | Canola | mitochondrion | 34.52 | 45.31 |
| CDX71752 | Canola | cytosol | 35.52 | 41.63 |
| CDY48932 | Canola | endoplasmic reticulum | 39.88 | 40.94 |
| CDX71753 | Canola | endoplasmic reticulum | 39.48 | 40.53 |
| CDY58789 | Canola | endoplasmic reticulum, golgi | 39.29 | 39.76 |
| CDY45704 | Canola | endoplasmic reticulum, golgi | 38.69 | 39.16 |
| CDX89107 | Canola | mitochondrion | 34.92 | 38.43 |
| CDX88050 | Canola | plastid | 40.08 | 37.83 |
| CDX80388 | Canola | plastid | 39.88 | 37.57 |
| CDY18897 | Canola | golgi, mitochondrion, plastid, vacuole | 37.5 | 36.99 |
| CDX71749 | Canola | cytosol, golgi, plasma membrane | 31.55 | 36.64 |
| CDY37069 | Canola | golgi | 37.9 | 36.52 |
| CDY27355 | Canola | golgi, mitochondrion, nucleus, plasma membrane, plastid | 38.1 | 36.36 |
| CDX71750 | Canola | plasma membrane | 36.9 | 35.77 |
| CDY48930 | Canola | plasma membrane | 37.5 | 35.66 |
| CDY08097 | Canola | plastid | 38.69 | 35.65 |
| CDY05887 | Canola | golgi | 38.69 | 35.65 |
| CDY25494 | Canola | mitochondrion | 38.1 | 33.16 |
| CDY18896 | Canola | golgi, plasma membrane, plastid | 25.79 | 32.99 |
| CDY48931 | Canola | plasma membrane | 21.43 | 32.93 |
| CDX74769 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 36.31 | 28.68 |
| CDY42493 | Canola | cytosol | 34.92 | 20.35 |
Protein Annotations
| EnsemblPlants:CDY09932 | EnsemblPlantsGene:GSBRNA2T00031701001 | GO:A0A078FA53 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LipoPS_modifying | ncoils:Coil | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF28 | PFAM:PF05686 | ProteinID:CDY09932 |
| ProteinID:CDY09932.1 | SEG:seg | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI0004EE3A12 | UniProt:A0A078FA53 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC08g45190DBnaC08g45190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA53]
Coordinates
chrLK032000:+:137716..139903
Molecular Weight (calculated)
58646.4 Da
IEP (calculated)
8.780
GRAVY (calculated)
-0.509
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRLRLPQK TSPRSPSYLL LCLLALSFFS FTALLFYKVD DFITQTKTLA GHNLEPTPWH IFPRKSFSEA SRRSQAYRIL QCSYFSCPYK PVLEPKSLLS
101: DSVSGRRTQQ PKCPDVFRWI QRDLEPWGET GVTKEHVEKA KESAAFRVVI LSGKLYVDLF YACVQSRMMF TVWGILQLLN KYPGMVPDVD MMFDCMDKPI
201: INRTEPQSFP APLFRYCTNE AHLDIPFPDW SFWGWSETNL RPWDEEFGDI KQGSKRSSWG SKQPRAYWKG NPDVVSPIRM ELMKCNHSRL WGAQIMRQNW
301: AEEAKGGFEQ SKLSNQCNHR YKIYAEGYAW SVSLKYIMSC GSMTLIISPE FEDFFSRGLL PKENYWPVST TDLCRSIKFA VDWGNANPSD AEAIGKRGQG
401: YMESISMNRV YDYMFHLIIE YSKLQKFKPE KPYSAKEVCE GSLLCFAEQK ERDLLERSRA VPSLDRPCKL PDEDRSILQR LIQQKKKTTE DVRNMEMTRT
501: ERSS
101: DSVSGRRTQQ PKCPDVFRWI QRDLEPWGET GVTKEHVEKA KESAAFRVVI LSGKLYVDLF YACVQSRMMF TVWGILQLLN KYPGMVPDVD MMFDCMDKPI
201: INRTEPQSFP APLFRYCTNE AHLDIPFPDW SFWGWSETNL RPWDEEFGDI KQGSKRSSWG SKQPRAYWKG NPDVVSPIRM ELMKCNHSRL WGAQIMRQNW
301: AEEAKGGFEQ SKLSNQCNHR YKIYAEGYAW SVSLKYIMSC GSMTLIISPE FEDFFSRGLL PKENYWPVST TDLCRSIKFA VDWGNANPSD AEAIGKRGQG
401: YMESISMNRV YDYMFHLIIE YSKLQKFKPE KPYSAKEVCE GSLLCFAEQK ERDLLERSRA VPSLDRPCKL PDEDRSILQR LIQQKKKTTE DVRNMEMTRT
501: ERSS
001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
Arabidopsis Description
F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.