Factsheet for TraesCS1D01G098300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G117800.1	Wheat	mitochondrion	90.33	90.52
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	90.33	90.33
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	89.09	84.41
Zm00001d024854_P001	Maize	mitochondrion	71.81	72.71
EES17717	Sorghum	mitochondrion	74.07	72.43
Os05t0149500-01	Rice	extracellular	43.83	71.96
GSMUA_Achr7P06580_001	Banana	cytosol	39.51	61.34
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	51.03	53.45
Solyc06g076980.2.1	Tomato	unclear	50.41	52.92
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	49.79	52.27
VIT_06s0004g06630.t01	Wine grape	plasma membrane	48.15	50.43
CDY10259	Canola	mitochondrion	51.23	49.5
Bra015563.1-P	Field mustard	mitochondrion	51.23	49.4
CDY06688	Canola	mitochondrion	51.23	49.4
KRH30306	Soybean	plastid	50.21	49.19
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	50.41	48.51
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	50.41	48.23
CDY09932	Canola	endoplasmic reticulum, golgi	50.0	48.21
AT1G07220.1	Thale cress	mitochondrion	49.79	47.73
TraesCS7D01G325300.1	Wheat	cytosol	26.13	40.32
TraesCS2D01G365700.1	Wheat	golgi	37.24	39.01
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	35.6	36.12
TraesCS2D01G365600.1	Wheat	plastid	39.92	34.95
TraesCS7D01G410200.1	Wheat	cytosol, extracellular, golgi	34.57	31.23
TraesCS7D01G325000.2	Wheat	cytosol	35.39	31.16

Protein Annotations

EnsemblPlants:TraesCS1D01G098300.1	EnsemblPlantsGene:TraesCS1D01G098300	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686
SEG:seg	SMART:SM00672	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1D:+:85178850..85181611

Molecular Weight (calculated)

54666.5 Da

IEP (calculated)

8.429

GRAVY (calculated)

-0.362

Length

486 amino acids

Sequence
(BLAST)

001: MLVGQCLPGV LPWTMFREGG STLTQISCML CVLAIKLVGT FALNAYDDAL SRTRTLLGHN LEPTPWHPFP HDKGRPPPRA ALRCASYLSC LPPLSQPKPA
101: AAAAANASRP RQCPSYFAAI RRDLAPWRRR DGGGGGITRA LLESGRHRAS MRVTITGGGT RLHVDLYYAC VQSRALFTVW SLLQLMRRYP GRVPDVDLMF
201: DCMDRPAINR TEHTGEGAPP PPPLFRYCTT RDHLDIPFPD WSFWGWPETH IEPWTREFRS IKQGSRRVRW PDRVPTAYWK GNPDVASPLR LALLACNDTN
301: LWRAEIMRQN WEEEAKSGYQ NSKLSSQCTH RYKIYAEGFA WSVSLKYILS CGSMALLIDP LYQDFFSRGL EPRVNHWPVS TVGMCESIRD AVEWGNAHPE
401: DAERVGKRGQ RLMQELGMDT VYDYMLHLLT EYAALLDFRP GPPHSSQEVC AGSVLCLADD RQRRFLEASA AYPATAGPCS MPPSDG

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.