Factsheet for TraesCS2D01G365600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G386200.1	Wheat	plastid	94.05	94.39
TraesCS2A01G368900.2	Wheat	plastid	91.89	91.89
Os04t0534100-01	Rice	mitochondrion	59.64	75.57
Zm00001d002836_P006	Maize	plastid	71.89	73.75
EES11181	Sorghum	plastid	73.69	73.69
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.13	67.37
VIT_16s0050g00190.t01	Wine grape	nucleus	33.69	66.79
VIT_02s0025g03710.t01	Wine grape	cytosol	30.45	62.13
KRH08971	Soybean	cytosol	26.31	61.09
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	52.07	60.33
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	53.69	59.72
PGSC0003DMT400000701	Potato	mitochondrion	8.11	58.44
KRH65106	Soybean	cytosol	18.2	58.38
VIT_15s0046g03110.t01	Wine grape	cytosol	39.28	57.98
KRH09038	Soybean	cytosol	27.75	57.04
VIT_15s0046g03120.t01	Wine grape	cytosol	42.88	55.22
VIT_15s0046g03080.t01	Wine grape	cytosol	41.8	54.85
KRH08981	Soybean	plastid	37.48	54.74
KRH09051	Soybean	cytosol, nucleus, plasma membrane	26.49	54.44
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	50.09	54.09
CDY69828	Canola	mitochondrion	37.3	53.91
VIT_15s0046g03050.t01	Wine grape	cytosol	40.9	53.66
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	49.37	53.31
VIT_15s0046g03140.t01	Wine grape	cytosol	22.16	52.79
Solyc03g025780.2.1	Tomato	golgi	47.93	52.47
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	49.37	52.19
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	46.49	51.81
TraesCS2D01G365700.1	Wheat	golgi	43.06	51.51
VIT_15s0046g03100.t01	Wine grape	mitochondrion	11.71	50.78
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	49.55	50.74
KRH09011	Soybean	cytosol	48.65	50.56
Bra009709.1-P	Field mustard	plastid	48.29	50.19
VIT_15s0046g03150.t01	Wine grape	golgi	46.67	49.9
CDX88050	Canola	plastid	47.93	49.81
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	42.34	49.79
KRH65107	Soybean	cytosol	13.69	49.67
CDX80388	Canola	plastid	47.75	49.53
TraesCS7D01G325300.1	Wheat	cytosol	28.11	49.52
KRH08953	Soybean	cytosol, extracellular, nucleus	12.79	48.97
Bra018021.1-P	Field mustard	golgi	47.57	48.89
AT3G48980.2	Thale cress	plastid	47.93	48.81
CDY45704	Canola	endoplasmic reticulum, golgi	43.6	48.59
CDY08097	Canola	plastid	47.75	48.45
Bra007592.1-P	Field mustard	cytosol	29.19	48.36
CDY48932	Canola	endoplasmic reticulum	42.7	48.27
CDY05887	Canola	golgi	47.57	48.26
KRH48182	Soybean	cytosol, golgi, plasma membrane	44.32	48.24
CDY58789	Canola	endoplasmic reticulum, golgi	43.24	48.19
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	43.24	48.19
Bra007590.1-P	Field mustard	cytosol	42.52	48.07
CDX71753	Canola	endoplasmic reticulum	42.52	48.07
Bra007591.1-P	Field mustard	cytosol	37.12	47.91
CDX71752	Canola	cytosol	37.12	47.91
KRH08960	Soybean	plastid	18.02	47.85
VIT_15s0046g03130.t01	Wine grape	cytosol	19.1	47.75
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	44.68	47.51
VIT_15s0046g03070.t01	Wine grape	golgi	44.86	47.43
KRH65090	Soybean	extracellular	40.54	47.27
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	42.16	46.99
KRG88606	Soybean	cytosol	18.2	46.98
KRG88612	Soybean	cytosol	23.6	46.79
CDY37069	Canola	golgi	43.78	46.46
AT2G45830.1	Thale cress	mitochondrion	43.6	46.27
KRH40487	Soybean	cytosol	28.83	46.11
KRH38478	Soybean	cytosol	48.47	45.83
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	42.16	45.79
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	43.42	45.64
AT3G61290.1	Thale cress	cytosol	36.76	44.84
AT1G63420.1	Thale cress	mitochondrion	45.77	43.94
Bra027639.1-P	Field mustard	mitochondrion	45.59	43.77
CDY25494	Canola	mitochondrion	45.59	43.7
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	42.16	43.58
PGSC0003DMT400055754	Potato	nucleus	11.89	43.42
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	39.1	43.4
KRH48168	Soybean	plasma membrane	38.74	43.26
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	39.64	42.88
VIT_15s0046g03060.t01	Wine grape	cytosol	9.01	42.02
KRH00707	Soybean	cytosol	27.57	41.8
Bra039310.1-P	Field mustard	golgi, mitochondrion	32.43	41.67
CDX71750	Canola	plasma membrane	38.92	41.54
CDX89107	Canola	mitochondrion	34.23	41.48
AT2G45840.1	Thale cress	plasma membrane	38.74	41.11
CDY18896	Canola	golgi, plasma membrane, plastid	29.01	40.86
CDX71749	Canola	cytosol, golgi, plasma membrane	31.71	40.55
Solyc05g048800.1.1	Tomato	cytosol	17.66	40.33
CDY48930	Canola	plasma membrane	38.2	40.0
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	38.2	40.0
AT3G61280.1	Thale cress	plasma membrane	38.56	39.93
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	34.95	39.92
TraesCS7D01G410200.1	Wheat	cytosol, extracellular, golgi	38.02	39.22
KRG88496	Soybean	cytosol	12.25	38.86
TraesCS7D01G325000.2	Wheat	cytosol	38.38	38.59
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	15.32	38.46
CDY48931	Canola	plasma membrane	21.62	36.59
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	11.89	36.26
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	40.18	34.95
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	39.82	34.64
PGSC0003DMT400000098	Potato	cytosol	42.34	27.11
CDY42493	Canola	cytosol	34.23	21.97

Protein Annotations

EnsemblPlants:TraesCS2D01G365600.1	EnsemblPlantsGene:TraesCS2D01G365600	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF33
PFAM:PF05686	SEG:seg	SMART:SM00672	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr2D:-:470386918..470392864

Molecular Weight (calculated)

62557.5 Da

IEP (calculated)

9.632

GRAVY (calculated)

-0.375

Length

555 amino acids

Sequence
(BLAST)

001: MAMEVAAAGA VDGQRSSKFV AALSRTSATF LFFSVVVVGA VAVSTRWITT TTSTLQVSFP TTAAIPAAAA VLHPKTQHPS PSPQLPSRPP RPPPAAYSIS
101: CPTPPLRRNT SHAARASKSS QTLGLALSSS SSCRSDPDLP PATTSATAAR SPSNSSCPSY FRFIHEDLRP WRAAGGVTRA MLARARATAS FRLVVLRGRA
201: FVQRFRPAFQ TRDLFTIWGI LQLLRRYPGR VPDLDLMFDC VDWPVVRAHL YRGEHAPFMP PLFRYCGDDR TLDIVFPDWS FWGWPEINIK PWDALYKDLK
301: DGNSKGKWFS REPYAYWKGN AAVATSRQEL VKCNVSSTQD WNARIYTQDW FKESKEGYKT SNLGSQCTHR YKIYIEGSAW SISQKYILAC DSMTLLVTPK
401: YYDFFSRSLM PLQHYWPVRD DNKCASIQYA VDWGNSHKQL AQRIGKEASD FVQQEVNMDH VYDYMLHLLT EYAKLLKFKP TKPPEAVEVC PESLVCQAGG
501: TEKKFLMESM VKSAHDSGPC DLPPPFNPQE LTMLKQRKEN SIRQVEMWER RASTT

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [plastid,endoplasmic reticulum,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.