Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G328300.1 | Wheat | endoplasmic reticulum | 72.28 | 93.01 |
| TraesCS7D01G325300.1 | Wheat | cytosol | 43.48 | 76.19 |
| TraesCS7D01G410200.1 | Wheat | cytosol, extracellular, golgi | 72.46 | 74.35 |
| EES13178 | Sorghum | nucleus | 59.24 | 55.05 |
| Zm00001d052744_P001 | Maize | cytosol | 58.88 | 54.26 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 35.69 | 53.24 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 35.33 | 52.14 |
| Os08t0101800-01 | Rice | cytosol | 52.9 | 50.43 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 28.62 | 49.22 |
| TraesCS2D01G365700.1 | Wheat | golgi | 40.94 | 48.71 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 37.5 | 47.48 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 42.21 | 44.21 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 34.96 | 40.29 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 38.77 | 38.84 |
| TraesCS2D01G365600.1 | Wheat | plastid | 38.59 | 38.38 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 39.49 | 36.27 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.16 | 35.39 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G325000.2 | EnsemblPlantsGene:TraesCS7D01G325000 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7D:-:415394334..415400534
Molecular Weight (calculated)
62678.0 Da
IEP (calculated)
7.870
GRAVY (calculated)
-0.574
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNFNPAAVE EERAAMVPPP PAAREEIVDD PPAEHQPSPS SATKPCWKTT TSSGAGVVIG TLMFLALLVG TNWIHHDAGY YSFHPVTDGG SFSRHGRATG
101: RTRSSTAPLV HIPFSCGNDT SSPSLCRRRA SPPAPSPSPS SSSSSQKQYS PGVPPPWCPD YFRHIHADME PWRPTGITRD AVERARPSAE FRLVVVSGRA
201: YVEKYRPSFQ RRDILTQWGI LQLLARYPDR VPDVDIMFGT GDVPVLRAAD YPDHSTAPPL FRYCKDGTEL AILWPDWSFW GWPEVNVRPW GALMEDFVRE
301: NGRLSWPDRE PYAFWKGNPD VSPVRRDLFR CNNDSAAGKE WNVRAFKQDW NAAHRNGFRD SDLAKQCRYR YKIYVQGRAW SVSEKYILAC DSPMLAIDTP
401: FQDFFTRGLV AGKHYWPIDP ARKCAAIKFA VDWGNAHPGQ ARRMGEEGSG FAREEMGMDY VYEYMLHVLT QYSALLRYKP TVPEKAVEVC VESMACPRRG
501: REREFMMESR ERYVAGRELC TLPPPFTTEE VREMAVRDEQ VRSKLLQMEE GH
101: RTRSSTAPLV HIPFSCGNDT SSPSLCRRRA SPPAPSPSPS SSSSSQKQYS PGVPPPWCPD YFRHIHADME PWRPTGITRD AVERARPSAE FRLVVVSGRA
201: YVEKYRPSFQ RRDILTQWGI LQLLARYPDR VPDVDIMFGT GDVPVLRAAD YPDHSTAPPL FRYCKDGTEL AILWPDWSFW GWPEVNVRPW GALMEDFVRE
301: NGRLSWPDRE PYAFWKGNPD VSPVRRDLFR CNNDSAAGKE WNVRAFKQDW NAAHRNGFRD SDLAKQCRYR YKIYVQGRAW SVSEKYILAC DSPMLAIDTP
401: FQDFFTRGLV AGKHYWPIDP ARKCAAIKFA VDWGNAHPGQ ARRMGEEGSG FAREEMGMDY VYEYMLHVLT QYSALLRYKP TVPEKAVEVC VESMACPRRG
501: REREFMMESR ERYVAGRELC TLPPPFTTEE VREMAVRDEQ VRSKLLQMEE GH
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.