Factsheet for GSMUA_Achr2P03930_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P03920_001	Banana	mitochondrion	73.24	72.46
GSMUA_Achr1P06820_001	Banana	mitochondrion	55.41	63.86
GSMUA_Achr5P12260_001	Banana	mitochondrion	61.35	59.74
GSMUA_Achr4P05440_001	Banana	nucleus	65.95	55.96
TraesCS7D01G325300.1	Wheat	cytosol	46.76	54.92
Zm00001d045318_P001	Maize	cytosol	17.57	50.78
HORVU2Hr1G091800.9	Barley	cytosol	37.57	47.28
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	67.3	47.25
GSMUA_Achr7P06580_001	Banana	cytosol	39.73	46.96
TraesCS2A01G369000.1	Wheat	golgi	54.32	43.6
TraesCS2D01G365700.1	Wheat	golgi	53.51	42.67
GSMUA_Achr1P06810_001	Banana	mitochondrion	63.24	42.47
GSMUA_Achr2P03940_001	Banana	mitochondrion	63.78	39.27
Os04t0534000-01	Rice	mitochondrion	52.7	38.39
KXG26784	Sorghum	mitochondrion	52.43	38.26
Zm00001d025933_P001	Maize	mitochondrion, plastid	52.43	38.19
EER87863	Sorghum	cytosol, peroxisome, vacuole	56.22	37.68
TraesCS7D01G410200.1	Wheat	cytosol, extracellular, golgi	54.05	37.17
TraesCS7A01G328500.1	Wheat	cytosol	56.76	37.1
TraesCS7B01G317100.1	Wheat	endoplasmic reticulum	54.05	36.9
HORVU0Hr1G021480.1	Barley	cytosol, golgi, nucleus	55.95	36.64
TraesCS7B01G229100.2	Wheat	cytosol, endoplasmic reticulum, plastid	57.3	36.43
TraesCS7D01G325000.2	Wheat	cytosol	53.24	35.69
EES13178	Sorghum	nucleus	56.49	35.19
Zm00001d052744_P001	Maize	cytosol	55.41	34.22
Os08t0101800-01	Rice	cytosol	52.97	33.85
Os06t0152700-01	Rice	cytosol, endoplasmic reticulum, plastid	50.0	33.82
TraesCS7A01G328300.1	Wheat	endoplasmic reticulum	38.92	33.57

Protein Annotations

EnsemblPlants:GSMUA_Achr2P03930_001	EnsemblPlants:GSMUA_Achr2T03930_001	EnsemblPlantsGene:GSMUA_Achr2G03930_001	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203
PANTHER:PTHR12203:SF59	PFAM:PF05686	SMART:SM00672	UniParc:UPI000295D7B4	UniProt:M0S4Y4	MapMan:35.2

Description

DTA2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G03930_001]

Coordinates

chr2:+:9479528..9480966

Molecular Weight (calculated)

43405.8 Da

IEP (calculated)

8.136

GRAVY (calculated)

-0.607

Length

370 amino acids

Sequence
(BLAST)

001: MVESAQKFAT FRLVVLDGRV YVEHYGGGFQ TRDVFTLWGL LQLANRYPGR IPDIDLMFNC NDTPSVKSAG HRSSPPPPLF RYCKDDKTLD IVFPDWSFWG
101: WAEVNIKPWR TLVKELEEGN RRVKWRDREP YAYWKGNPWV SDSRSDLMRC NVSKHHDWNA RLYALNWDSE KRQGYNNSNL ASQCKYKIFV EGRAWSVSNK
201: YILACDSPAL FVRTRFHDFF SRGLMPGRHY WPIREDDKCS SIKFAVDWGN KHQEEAEAMG TVGSSHMKEE VKMEYVYDYM LHLLIQYAKL LRYKPTVPEK
301: AIEFCLESVA CPATGIVKKL LMESMEKRTE EAEPCRIPPP FNPEELQEIM ERKANVLKQI ESWEDKKANI

Best Arabidopsis Sequence Match ( AT2G45830.5 )
(BLAST)

001: MLEKARRTAH FRVVILDGRV YVKKYRKSIQ TRDVFTLWGI VQLLRWYPGR LPDLELMFDP DDRPTVRSKD FQGQQHPAPP PLFRYCSDDA SLDIVFPDWS
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.