Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 1
- plastid 2
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d045318_P001 | Maize | cytosol | 15.54 | 66.41 |
EER87863 | Sorghum | cytosol, peroxisome, vacuole | 65.45 | 64.86 |
GSMUA_Achr2P03920_001 | Banana | mitochondrion | 35.1 | 51.34 |
GSMUA_Achr2P03930_001 | Banana | cytosol | 33.82 | 50.0 |
GSMUA_Achr1P06820_001 | Banana | mitochondrion | 27.61 | 47.04 |
Os02t0642700-01 | Rice | plastid | 40.59 | 46.84 |
Os08t0101800-01 | Rice | cytosol | 49.18 | 46.46 |
GSMUA_Achr4P05440_001 | Banana | nucleus | 35.47 | 44.5 |
Os04t0534000-01 | Rice | mitochondrion | 41.32 | 44.49 |
GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 40.95 | 42.5 |
Os05t0149500-01 | Rice | extracellular | 22.67 | 41.89 |
Os04t0534100-01 | Rice | mitochondrion | 32.18 | 40.18 |
GSMUA_Achr1P06810_001 | Banana | mitochondrion | 37.66 | 37.39 |
GSMUA_Achr2P03940_001 | Banana | mitochondrion | 39.12 | 35.61 |
Protein Annotations
MapMan:35.2 | EntrezGene:4340161 | ProteinID:BAF18752.1 | ProteinID:BAS96206.1 | ncoils:Coil | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006664 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
GO:GO:0046527 | InterPro:LipoPS_modifying | EnsemblPlantsGene:Os06g0152700 | EnsemblPlants:Os06t0152700-01 | PFAM:PF05686 | PANTHER:PTHR12203 |
PANTHER:PTHR12203:SF29 | UniProt:Q0DEH1 | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI0000E1269B | RefSeq:XP_015644231.1 |
SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF821, CAP10-like family protein. (Os06t0152700-01)
Coordinates
chr6:-:2717876..2721617
Molecular Weight (calculated)
61548.1 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.417
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHEPMSRSS SSFFRRDAAG NEERAALTTP PPLPAEDDMG GAPAGRRRWP SSVMRMKGVG SVMVGVVFLA LLILVHRWVG LDASFLRDSS MVRTSTRQWH
101: PHHNISTPPL MTLPPFSCGN GTAAPATCPA TPPSPPPTSK PATGGEPAAS CPDYFRYIHD DLRPWRGAGI TREAVERGRR HAYFRLVVVS GRAYVETYRR
201: SYQTRDAFTQ WGVAQLLRRY AGRVPDVDIM FACDDRGRVR AADFAAAPAD APPVFRYCRD ATTLDVVFPD WSFWGWPEVN IGAWPATLEA VRRESARVRW
301: PEREPFAFWK GNPGVARIRG ELMKCNPASD GKDWNARLFS QDWNHAIHNG FKDSSIPKQC LHRYKIYIEG EAWSVSEKYI MACDSPVLFV NTPYQDILSR
401: GLVAGEHYWP INRTRMCESI RAAVDWGNAH PAAARRIGEQ GSRFVREQMA MDYVYDYMFH LITEYAKLLR YKPTVPANAV EICAESMACA AAAGRERECM
501: DESVEGFVAG FDPCSLPPPF TEEEKREIAA KEEEVLRKVA KLEEENM
101: PHHNISTPPL MTLPPFSCGN GTAAPATCPA TPPSPPPTSK PATGGEPAAS CPDYFRYIHD DLRPWRGAGI TREAVERGRR HAYFRLVVVS GRAYVETYRR
201: SYQTRDAFTQ WGVAQLLRRY AGRVPDVDIM FACDDRGRVR AADFAAAPAD APPVFRYCRD ATTLDVVFPD WSFWGWPEVN IGAWPATLEA VRRESARVRW
301: PEREPFAFWK GNPGVARIRG ELMKCNPASD GKDWNARLFS QDWNHAIHNG FKDSSIPKQC LHRYKIYIEG EAWSVSEKYI MACDSPVLFV NTPYQDILSR
401: GLVAGEHYWP INRTRMCESI RAAVDWGNAH PAAARRIGEQ GSRFVREQMA MDYVYDYMFH LITEYAKLLR YKPTVPANAV EICAESMACA AAAGRERECM
501: DESVEGFVAG FDPCSLPPPF TEEEKREIAA KEEEVLRKVA KLEEENM
001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS
Arabidopsis Description
At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.