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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 1
  • plastid 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045318_P001 Maize cytosol 15.54 66.41
EER87863 Sorghum cytosol, peroxisome, vacuole 65.45 64.86
GSMUA_Achr2P03920_001 Banana mitochondrion 35.1 51.34
GSMUA_Achr2P03930_001 Banana cytosol 33.82 50.0
GSMUA_Achr1P06820_001 Banana mitochondrion 27.61 47.04
Os02t0642700-01 Rice plastid 40.59 46.84
Os08t0101800-01 Rice cytosol 49.18 46.46
GSMUA_Achr4P05440_001 Banana nucleus 35.47 44.5
Os04t0534000-01 Rice mitochondrion 41.32 44.49
GSMUA_Achr4P11970_001 Banana golgi, nucleus, plasma membrane 40.95 42.5
Os05t0149500-01 Rice extracellular 22.67 41.89
Os04t0534100-01 Rice mitochondrion 32.18 40.18
GSMUA_Achr1P06810_001 Banana mitochondrion 37.66 37.39
GSMUA_Achr2P03940_001 Banana mitochondrion 39.12 35.61
Protein Annotations
MapMan:35.2EntrezGene:4340161ProteinID:BAF18752.1ProteinID:BAS96206.1ncoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006629GO:GO:0006664GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0012505GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0046527InterPro:LipoPS_modifyingEnsemblPlantsGene:Os06g0152700EnsemblPlants:Os06t0152700-01PFAM:PF05686PANTHER:PTHR12203
PANTHER:PTHR12203:SF29UniProt:Q0DEH1SMART:SM00672TMHMM:TMhelixUniParc:UPI0000E1269BRefSeq:XP_015644231.1
SEG:seg:::::
Description
Protein of unknown function DUF821, CAP10-like family protein. (Os06t0152700-01)
Coordinates
chr6:-:2717876..2721617
Molecular Weight (calculated)
61548.1 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.417
Length
547 amino acids
Sequence
(BLAST)
001: MTHEPMSRSS SSFFRRDAAG NEERAALTTP PPLPAEDDMG GAPAGRRRWP SSVMRMKGVG SVMVGVVFLA LLILVHRWVG LDASFLRDSS MVRTSTRQWH
101: PHHNISTPPL MTLPPFSCGN GTAAPATCPA TPPSPPPTSK PATGGEPAAS CPDYFRYIHD DLRPWRGAGI TREAVERGRR HAYFRLVVVS GRAYVETYRR
201: SYQTRDAFTQ WGVAQLLRRY AGRVPDVDIM FACDDRGRVR AADFAAAPAD APPVFRYCRD ATTLDVVFPD WSFWGWPEVN IGAWPATLEA VRRESARVRW
301: PEREPFAFWK GNPGVARIRG ELMKCNPASD GKDWNARLFS QDWNHAIHNG FKDSSIPKQC LHRYKIYIEG EAWSVSEKYI MACDSPVLFV NTPYQDILSR
401: GLVAGEHYWP INRTRMCESI RAAVDWGNAH PAAARRIGEQ GSRFVREQMA MDYVYDYMFH LITEYAKLLR YKPTVPANAV EICAESMACA AAAGRERECM
501: DESVEGFVAG FDPCSLPPPF TEEEKREIAA KEEEVLRKVA KLEEENM
Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)
001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS
Arabidopsis Description
At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.